Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G408800.1 | Wheat | nucleus | 97.31 | 97.2 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 96.18 | 96.24 |
| HORVU2Hr1G092940.7 | Barley | nucleus | 91.13 | 91.08 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 20.88 | 56.53 |
| GSMUA_Achr11P... | Banana | cytosol | 9.93 | 53.47 |
| KXG26815 | Sorghum | nucleus | 55.16 | 53.22 |
| Zm00001d025979_P007 | Maize | nucleus | 51.91 | 50.82 |
| CDX89056 | Canola | cytosol | 16.61 | 50.43 |
| PGSC0003DMT400004663 | Potato | nucleus | 19.98 | 43.0 |
| GSMUA_Achr11P... | Banana | nucleus | 32.55 | 36.09 |
| KRH66436 | Soybean | endoplasmic reticulum | 32.88 | 35.13 |
| KRH48862 | Soybean | nucleus | 32.44 | 34.53 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 33.16 | 34.52 |
| GSMUA_Achr11P... | Banana | nucleus | 31.37 | 33.76 |
| PGSC0003DMT400004341 | Potato | nucleus | 32.94 | 32.48 |
| Solyc01g088700.2.1 | Tomato | nucleus | 32.72 | 32.3 |
| CDY42674 | Canola | plastid | 28.68 | 32.18 |
| Bra014505.1-P | Field mustard | cytosol | 29.8 | 32.07 |
| KRH46542 | Soybean | nucleus | 32.55 | 31.57 |
| KRH75579 | Soybean | endoplasmic reticulum | 32.21 | 31.5 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 34.34 | 31.48 |
| AT3G60240.4 | Thale cress | cytosol | 29.85 | 30.8 |
| CDX98293 | Canola | cytosol | 11.67 | 29.13 |
| Solyc08g077700.2.1 | Tomato | nucleus | 26.77 | 28.94 |
| TraesCS2A01G209100.1 | Wheat | nucleus | 30.36 | 28.84 |
| TraesCS2A01G354900.1 | Wheat | cytosol | 9.93 | 22.41 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003891 | InterPro:IPR016021 | InterPro:Initiation_fac_eIF4g_MI |
| InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 | PFAM:PF02847 | PFAM:PF02854 | PFscan:PS51366 | PANTHER:PTHR23253 |
| PANTHER:PTHR23253:SF35 | SMART:SM00543 | SMART:SM00544 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2A01G390600 | EnsemblPlants:TraesCS2A01G390600.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:640086619..640095091
Molecular Weight (calculated)
195277.0 Da
IEP (calculated)
7.325
GRAVY (calculated)
-0.599
Length
1782 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYRNQFRPDR FNDNTNAARR TGRGCIGGTH HWVVSGGRGS AAPGTRLRSP PNRSGRPATV QQYRPRSPAS VAPQGNATDY TPVVSAADEH TEPENRASLG
0101: SLESQKSSNA PDQSDVVNLE SAEGARAEDS SMPTIHSEGY SSSAFTLQFG TLSPGVITKQ CIPCSTSAPP DLNEKKHEKA HRGLLSDESN VVSMPSAGGQ
0201: QKQESKDNLI ICGQTDSIDT YDSVPAMVSS NSCVLADPVL PHTPGLYYVA PAEKVSTDSC KVFPRNPSSP THQQWQKQDT RKDASQSDTM HKYPASNPKM
0301: SVQIPPPYTP SMAPPSFMLP VNGRPLPAAF QQKQPQVPVE FRGQGVPMGN VPHVPPFFLH GAQARALQPP AFVHQGQGLG CAPPACPHLP QLGNMRITQE
0401: LPQQQARSCD EQKRPVRITH PDTHEELMLD RRGHSYIDAA SGAMPLHHMN QLAQPVTSFP PLHEVYYRPN MYNTGHIYLP TTNAVPASNR QMCPRMQTPR
0501: HSLDPNINNQ AVTSISPPMQ NPWLGASSRL PTNLRSASEV SSLKGLLPSD VSFPGQGALK PPTIFLAENN ELSSQTSTPT CAAETPTLLR YSVESALSSQ
0601: QRVHKLGLEI SPHPEKLVSE ANLKLPAATS GLNCSTSPQS VLTQQAQTGS ALVDRVTSIA GPQNISAYKL TSVCVASGTS SVEAKLESSA VPSTTSSSGA
0701: KGQLYHIVPQ SEIFLDTESK NSKYDGNSIL GKPPLLYTQE TLPPKSPTTS IFTESLKARV NHVPLPETSE ANCSAPLQMQ DMMREEHTVN AGVTCSKSKA
0801: EQVDMTMHMP GASSGSGNGT DVSKLVNVPT CAESGDLHLS LHIGNVSPSD KNNGSSSDVQ IGPCSLNDSI QDNENISMIM AIASNSTSAL KEIERGSIDS
0901: VVSNQCSVAA ASMVQTKKPV LEAAKPKTTH GRRKKRKEIL PKSSDSAEEV VQSSSTVDKE ICTLDAEMGS SAGSNDNQNK NDIFDWEGDM EISRDNYGYG
1001: QKRYSRDFLL TFAQSCANLP EGFKIGSDIH DAIMYVGSEH NPNRERTKDR ASTISQANRH TGSNKLNDNN WRKLHPPFSG RDPLSGRGSS RNGSQNQLPN
1101: QYNGEILSRA MKEVACQRSM SRGSVDQRWQ HRTNQAMSSP SQVSMPVMHK AEKKYEIGKV SDEEEVKQRQ LKAILNKLTP QNFEKLFEQV KALNIDNIIT
1201: LNGVISQIFD KALMEPTFCE MYASFCFSLA GELPNFVKDD EKITFKRLLL NKCQEEFERG EREQAEAEKA EEEGGMKQSE NEREEKRLRA RRRMLGNIRL
1301: IGELYKKKML TERIMHECIK KLLGEYQHPD EEDLEALCKL MSTIGEMIDH IRAKVHMDFY FDIIQKLSAN SKLSSRIRFM LEDVIDLRNN KWRQRRKVEG
1401: PKKIEEVRRD AVKQKMSQST RVGSSPNYNS SASSISSSAR PGPPPDYGVR GSSASRGSSQ VRVYGSQNVN LDTRYQTSNR AMSVPLHQRR SDKSIRLSPQ
1501: GDLGKEMSIC GKPPASNDIL PEVPLNSHHG QTLKSSRQSS FTGSTSNQTN YQATAGAPKI QSWGTADHAL PILVTTASPV GQMHTPSIAM NDICYEAIIL
1601: PEEILQEKAI LTIKEFYSAK DEKEVGLCMK ELNAPSFYPS LVSLWINDSF ERKDLERELL AKLLVNLCKS QESLLSQTVL LQGFQNVLST LEDAVTDAPK
1701: ATEFLGRIFA KVILEDVLSL TEVGVLLQDG GEEPATDQGL ASEVLGSMLE SIRVERGDSA VDEISARSKP HPENLRQPGL CA
0101: SLESQKSSNA PDQSDVVNLE SAEGARAEDS SMPTIHSEGY SSSAFTLQFG TLSPGVITKQ CIPCSTSAPP DLNEKKHEKA HRGLLSDESN VVSMPSAGGQ
0201: QKQESKDNLI ICGQTDSIDT YDSVPAMVSS NSCVLADPVL PHTPGLYYVA PAEKVSTDSC KVFPRNPSSP THQQWQKQDT RKDASQSDTM HKYPASNPKM
0301: SVQIPPPYTP SMAPPSFMLP VNGRPLPAAF QQKQPQVPVE FRGQGVPMGN VPHVPPFFLH GAQARALQPP AFVHQGQGLG CAPPACPHLP QLGNMRITQE
0401: LPQQQARSCD EQKRPVRITH PDTHEELMLD RRGHSYIDAA SGAMPLHHMN QLAQPVTSFP PLHEVYYRPN MYNTGHIYLP TTNAVPASNR QMCPRMQTPR
0501: HSLDPNINNQ AVTSISPPMQ NPWLGASSRL PTNLRSASEV SSLKGLLPSD VSFPGQGALK PPTIFLAENN ELSSQTSTPT CAAETPTLLR YSVESALSSQ
0601: QRVHKLGLEI SPHPEKLVSE ANLKLPAATS GLNCSTSPQS VLTQQAQTGS ALVDRVTSIA GPQNISAYKL TSVCVASGTS SVEAKLESSA VPSTTSSSGA
0701: KGQLYHIVPQ SEIFLDTESK NSKYDGNSIL GKPPLLYTQE TLPPKSPTTS IFTESLKARV NHVPLPETSE ANCSAPLQMQ DMMREEHTVN AGVTCSKSKA
0801: EQVDMTMHMP GASSGSGNGT DVSKLVNVPT CAESGDLHLS LHIGNVSPSD KNNGSSSDVQ IGPCSLNDSI QDNENISMIM AIASNSTSAL KEIERGSIDS
0901: VVSNQCSVAA ASMVQTKKPV LEAAKPKTTH GRRKKRKEIL PKSSDSAEEV VQSSSTVDKE ICTLDAEMGS SAGSNDNQNK NDIFDWEGDM EISRDNYGYG
1001: QKRYSRDFLL TFAQSCANLP EGFKIGSDIH DAIMYVGSEH NPNRERTKDR ASTISQANRH TGSNKLNDNN WRKLHPPFSG RDPLSGRGSS RNGSQNQLPN
1101: QYNGEILSRA MKEVACQRSM SRGSVDQRWQ HRTNQAMSSP SQVSMPVMHK AEKKYEIGKV SDEEEVKQRQ LKAILNKLTP QNFEKLFEQV KALNIDNIIT
1201: LNGVISQIFD KALMEPTFCE MYASFCFSLA GELPNFVKDD EKITFKRLLL NKCQEEFERG EREQAEAEKA EEEGGMKQSE NEREEKRLRA RRRMLGNIRL
1301: IGELYKKKML TERIMHECIK KLLGEYQHPD EEDLEALCKL MSTIGEMIDH IRAKVHMDFY FDIIQKLSAN SKLSSRIRFM LEDVIDLRNN KWRQRRKVEG
1401: PKKIEEVRRD AVKQKMSQST RVGSSPNYNS SASSISSSAR PGPPPDYGVR GSSASRGSSQ VRVYGSQNVN LDTRYQTSNR AMSVPLHQRR SDKSIRLSPQ
1501: GDLGKEMSIC GKPPASNDIL PEVPLNSHHG QTLKSSRQSS FTGSTSNQTN YQATAGAPKI QSWGTADHAL PILVTTASPV GQMHTPSIAM NDICYEAIIL
1601: PEEILQEKAI LTIKEFYSAK DEKEVGLCMK ELNAPSFYPS LVSLWINDSF ERKDLERELL AKLLVNLCKS QESLLSQTVL LQGFQNVLST LEDAVTDAPK
1701: ATEFLGRIFA KVILEDVLSL TEVGVLLQDG GEEPATDQGL ASEVLGSMLE SIRVERGDSA VDEISARSKP HPENLRQPGL CA
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.