Factsheet for TraesCS3A01G333300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G363500.1	Wheat	golgi, unclear	98.89	99.78
Os01t0805900-01	Rice	plasma membrane	97.34	98.21
PGSC0003DMT400072466	Potato	cytosol	96.67	97.54
KXG32297	Sorghum	cytosol	96.23	97.31
TraesCS1A01G258800.1	Wheat	golgi	95.79	97.08
Solyc10g080940.1.1	Tomato	nucleus	96.9	96.68
GSMUA_Achr3P18460_001	Banana	cytosol	82.71	96.63
TraesCS1A01G309700.1	Wheat	golgi	95.34	96.2
TraesCS5A01G534300.1	Wheat	cytosol	95.12	95.97
VIT_17s0000g02450.t01	Wine grape	cytosol	94.23	95.51
TraesCS5A01G416400.1	Wheat	cytosol	92.9	94.37
TraesCS7A01G466600.1	Wheat	golgi	92.68	93.72
KRH41834	Soybean	cytosol	91.8	93.03
KRH60536	Soybean	endoplasmic reticulum	91.35	92.58
TraesCS4A01G296600.1	Wheat	cytosol	90.47	91.69
TraesCS3D01G326900.1	Wheat	plastid	99.56	89.98
HORVU3Hr1G078940.1	Barley	mitochondrion	99.11	88.87
TraesCS4A01G257800.1	Wheat	cytosol	42.35	42.35
TraesCS1A01G350200.1	Wheat	golgi	42.13	42.13
TraesCS5A01G407800.1	Wheat	golgi	41.91	41.91
TraesCS2A01G185500.2	Wheat	cytosol	41.02	41.11
TraesCS4A01G065700.1	Wheat	cytosol	40.58	40.76
TraesCS1A01G099400.1	Wheat	cytosol	34.59	33.26

Protein Annotations

Gene3D:1.10.287.600	MapMan:20.1.1.2	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	InterPro:Beta_tubulin	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005198	GO:GO:0005200
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
InterPro:IPR023123	InterPro:IPR036525	InterPro:IPR037103	PFAM:PF00091	PFAM:PF03953	PRINTS:PR01161
PRINTS:PR01163	ScanProsite:PS00227	PANTHER:PTHR11588	PANTHER:PTHR11588:SF241	SMART:SM00864	SMART:SM00865
SUPFAM:SSF52490	SUPFAM:SSF55307	EnsemblPlantsGene:TraesCS3A01G333300	EnsemblPlants:TraesCS3A01G333300.1	InterPro:Tub_FtsZ_C	InterPro:Tubulin
InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_C	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase
TIGR:cd02187	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:578872992..578875539

Molecular Weight (calculated)

50680.9 Da

IEP (calculated)

4.453

GRAVY (calculated)

-0.364

Length

451 amino acids

Sequence
(BLAST)

001: MLAKMREILH IQGGQCGNQI GAKFWEVVCD EHGIDPTGRY TGTSDLQLER VNVYYNEASC GRFVPRAVLM DLEPGTMDSV RTGPYGQIFR PDNFVFGQSG
101: AGNNWAKGHY TEGAELIDSV LDVVRKEAEN CDCLQGFQVC HSLGGGTGSG MGTLLISKIR EEYPDRMMLT FSVFPSPKVS DTVVEPYNAT LSVHQLVENA
201: DECMVLDNEA LYDICFRTLK LTTPSFGDLN HLISATMSGV TCCLRFPGQL NSDLRKLAVN LIPFPRLHFF MVGFAPLTSR GSQQYRALTV PELTQQMWDA
301: KNMMCAADPR HGRYLTASAM FRGKMSTKEV DEQMINVQNK NSSYFVEWIP NNVKSSVCDI PPTGLSMAST FVGNSTSIQE MFRRVSEQFT AMFRRKAFLH
401: WYTGEGMDEM EFTEAESNMN DLVSEYQQYQ DATADEEGEY EDEDQEPEED M

Best Arabidopsis Sequence Match ( AT5G62700.1 )
(BLAST)

001: MREILHIQGG QCGNQIGAKF WEVVCAEHGI DPTGRYTGDS DLQLERINVY YNEASCGRFV PRAVLMDLEP GTMDSLRSGP YGQTFRPDNF VFGQSGAGNN
101: WAKGHYTEGA ELIDSVLDVV RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV EPYNATLSVH QLVENADECM
201: VLDNEALYDI CFRTLKLTTP SFGDLNHLIS ATMSGVTCCL RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRSLTVPELT QQMWDSKNMM
301: CAADPRHGRY LTASAMFRGK MSTKEVDEQM LNVQNKNSSY FVEWIPNNVK STVCDIPPTG LKMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG
401: EGMDEMEFTE AESNMNDLVS EYQQYQDATA DEEGDYEDEE EGEYQQEEEY

Arabidopsis Description

TUBB3Tubulin beta-2 chain [Source:UniProtKB/Swiss-Prot;Acc:Q56YW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.