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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 2.7 100.0
TraesCS4D01G015400.1 Wheat cytosol 99.55 99.55
TraesCS4B01G017100.1 Wheat cytosol 98.88 98.88
Os03t0661300-01 Rice plasma membrane 94.83 94.62
Zm00001d033457_P001 Maize plasma membrane 93.93 93.93
EER93713 Sorghum cytosol 93.71 93.71
Zm00001d013612_P002 Maize plasma membrane 93.26 92.84
TraesCS5A01G416400.1 Wheat cytosol 91.91 92.12
TraesCS7A01G466600.1 Wheat golgi 92.13 91.93
TraesCS5A01G534300.1 Wheat cytosol 91.24 90.83
TraesCS3A01G333300.1 Wheat cytosol 91.69 90.47
TraesCS1A01G258800.1 Wheat golgi 90.34 90.34
TraesCS1A01G309700.1 Wheat golgi 90.56 90.16
CDX68422 Canola cytosol 57.98 89.9
VIT_02s0025g03540.t01 Wine grape cytosol 89.44 89.64
HORVU4Hr1G002530.2 Barley cytosol 99.1 89.63
KRH41169 Soybean cytosol 89.44 89.44
KRH59870 Soybean endoplasmic reticulum 89.44 89.24
TraesCS5A01G407800.1 Wheat golgi 41.8 41.24
TraesCS4A01G257800.1 Wheat cytosol 41.57 41.02
TraesCS1A01G350200.1 Wheat golgi 41.35 40.8
TraesCS2A01G185500.2 Wheat cytosol 40.45 40.0
TraesCS4A01G065700.1 Wheat cytosol 39.78 39.42
TraesCS1A01G099400.1 Wheat cytosol 35.73 33.9
Protein Annotations
Gene3D:1.10.287.600MapMan:20.1.1.2Gene3D:3.30.1330.20Gene3D:3.40.50.1440InterPro:Beta-tubulin_BSInterPro:Beta_tubulin
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005198
GO:GO:0005200GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005856GO:GO:0005874GO:GO:0007017GO:GO:0008150GO:GO:0009987GO:GO:0016043
GO:GO:0016787InterPro:IPR023123InterPro:IPR036525InterPro:IPR037103PFAM:PF00091PFAM:PF03953
PRINTS:PR01161PRINTS:PR01163ScanProsite:PS00227ScanProsite:PS00228PANTHER:PTHR11588PANTHER:PTHR11588:SF246
SMART:SM00864SMART:SM00865SUPFAM:SSF52490SUPFAM:SSF55307EnsemblPlantsGene:TraesCS4A01G296600EnsemblPlants:TraesCS4A01G296600.1
InterPro:Tub_FtsZ_CInterPro:TubulinInterPro:Tubulin/FtsZ_2-layer-sand-domInterPro:Tubulin/FtsZ_C_sfInterPro:Tubulin/FtsZ_GTPase_sfInterPro:Tubulin_C
InterPro:Tubulin_CSInterPro:Tubulin_FtsZ_GTPaseTIGR:cd02187SEG:seg::
Description
No Description!
Coordinates
chr4A:-:596624604..596628189
Molecular Weight (calculated)
49734.8 Da
IEP (calculated)
4.463
GRAVY (calculated)
-0.348
Length
445 amino acids
Sequence
(BLAST)
001: MREILHIQGG QCGNQIGAKF WEVICGEHGV DPTGQYTGTA PEQLERMDVY FNEAGGNRYV PRAVLMDLEP GTMDSLRSGP IGAIFRPDNF VYGQSGAGNN
101: WAKGHYTEGA ELIDSVLDVV RKEAENSDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV EPYNATLSVH QLVENADECM
201: VLDNEALYDI CFRTLKLTNP SFGDLNHLIS ATMSGVTCCL RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRALTVPELT QQMWDAKNMM
301: CAADPRHGRY LTASAMFRGK MSTKEVDEQM MNVQNKNSSY FVEWIPNNVK SSVCDIPPVG LAMSSTFVGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTS
401: EGMDEMEFTE AESNMNDLVA EYQQYQDATA EEEYDDEEEP AADQA
Best Arabidopsis Sequence Match ( AT5G23860.1 )
(BLAST)
001: MREILHIQGG QCGNQIGAKF WEVVCAEHGI DSTGRYQGEN DLQLERVNVY YNEASCGRFV PRAVLMDLEP GTMDSVRSGP YGQIFRPDNF VFGQSGAGNN
101: WAKGHYTEGA ELIDSVLDVV RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV EPYNATLSVH QLVENADECM
201: VLDNEALYDI CFRTLKLTTP SFGDLNHLIS ATMSGVTCCL RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRALTVPELT QQMWDAKNMM
301: CAADPRHGRY LTASAMFRGK MSTKEVDEQM INVQNKNSSY FVEWIPNNVK STVCDIPPTG LKMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG
401: EGMDEMEFTE AESNMNDLVS EYQQYQDATA DEEEGYEYEE DEVEVQEEQ
Arabidopsis Description
TUBB8Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UKM5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.