Factsheet for GSMUA_Achr11P18440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68422	Canola	cytosol	83.33	3.48
GSMUA_Achr11P...	Banana	cytosol	100.0	3.43
GSMUA_AchrUn_...	Banana	cytosol	100.0	3.3
GSMUA_Achr3P23490_001	Banana	cytosol	100.0	3.22
GSMUA_Achr3P18460_001	Banana	cytosol	100.0	3.11
GSMUA_Achr6P08450_001	Banana	cytosol	100.0	3.1
GSMUA_Achr5P26680_001	Banana	cytosol	100.0	3.09
GSMUA_Achr8P07060_001	Banana	cytosol	100.0	3.08
GSMUA_Achr2P01410_001	Banana	cytosol	100.0	3.08
GSMUA_Achr6P16040_001	Banana	cytosol	100.0	3.07
GSMUA_Achr5P00290_001	Banana	cytosol	100.0	3.05
GSMUA_Achr6P04600_001	Banana	cytosol	100.0	2.84
Zm00001d033457_P001	Maize	plasma membrane	100.0	2.7
TraesCS4D01G015400.1	Wheat	cytosol	100.0	2.7
TraesCS4B01G017100.1	Wheat	cytosol	100.0	2.7
TraesCS4A01G296600.1	Wheat	cytosol	100.0	2.7
EER93713	Sorghum	cytosol	100.0	2.7
Os03t0661300-01	Rice	plasma membrane	100.0	2.69
GSMUA_Achr4P26250_001	Banana	cytosol	100.0	2.69
GSMUA_Achr4P11980_001	Banana	plasma membrane	100.0	2.69
Zm00001d013612_P002	Maize	plasma membrane	100.0	2.68
GSMUA_Achr10P...	Banana	cytosol	91.67	2.58
HORVU4Hr1G087740.1	Barley	cytosol	100.0	2.56
GSMUA_Achr5P21740_001	Banana	cytosol	100.0	2.39
GSMUA_Achr8P33350_001	Banana	cytosol	58.33	2.32
GSMUA_Achr4P05450_001	Banana	cytosol	50.0	2.14
GSMUA_Achr1P14750_001	Banana	cytosol	33.33	0.84
GSMUA_Achr7P17960_001	Banana	cytosol	25.0	0.76
GSMUA_Achr5P14830_001	Banana	cytosol	25.0	0.7
GSMUA_Achr2P12390_001	Banana	cytosol, plasma membrane	25.0	0.67
GSMUA_Achr6P19990_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P29670_001	Banana	cytosol	0.0	0.0
GSMUA_Achr7P01800_001	Banana	cytosol	0.0	0.0
GSMUA_Achr7P08080_001	Banana	cytosol	0.0	0.0
GSMUA_Achr8P15410_001	Banana	cytosol	0.0	0.0
GSMUA_Achr2P17250_001	Banana	cytosol	0.0	0.0
GSMUA_Achr5P10720_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P00620_001	Banana	cytosol	0.0	0.0
GSMUA_Achr1P17290_001	Banana	cytosol	0.0	0.0
GSMUA_Achr5P12310_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr11P18440_001

EnsemblPlants:GSMUA_Achr11T18440_001

EnsemblPlantsGene:GSMUA_Achr11G18440_001

UniParc:UPI0002962FD0

UniProt:M0RTC4

MapMan:35.2

Description

tubulin/FtsZ domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G18440_001]

Coordinates

chr11:+:19827868..19827906

Molecular Weight (calculated)

1352.6 Da

IEP (calculated)

4.109

GRAVY (calculated)

-0.433

Length

12 amino acids

Sequence
(BLAST)

1: MWDAKNMCAA DP

Best Arabidopsis Sequence Match ( AT2G29550.1 )
(BLAST)

001: MREILHIQGG QCGNQIGSKF WEVVNLEHGI DQTGRYVGDS ELQLERVNVY YNEASCGRYV PRAVLMDLEP GTMDSVRSGP YGQIFRPDNF VFGQSGAGNN
101: WAKGHYTEGA ELIDSVLDVV RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMMTFSVF PSPKVSDTVV EPYNATLSVH QLVENADECM
201: VLDNEALYDI CFRTLKLSTP SFGDLNHLIS ATMSGVTCCL RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRNLTVPELT QQMWDAKNMM
301: CAADPRHGRY LTASAMFRGK MSTKEVDEQM LNVQNKNSSY FVEWIPNNVK STVCDIPPTG LKMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG
401: EGMDEMEFTE AESNMNDLVS EYQQYQDATA DEEGEYEEEE AEYEQEETY

Arabidopsis Description

TUBB7Tubulin beta-7 chain [Source:UniProtKB/Swiss-Prot;Acc:P29515]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.