Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P01800_001 | Banana | cytosol | 93.24 | 98.77 |
GSMUA_Achr8P15410_001 | Banana | cytosol | 52.91 | 95.38 |
TraesCS2D01G202200.1 | Wheat | cytosol | 97.9 | 93.33 |
TraesCS2B01G221800.1 | Wheat | cytosol | 97.9 | 93.33 |
TraesCS2A01G185500.2 | Wheat | cytosol | 97.9 | 93.33 |
Zm00001d021891_P001 | Maize | cytosol | 97.67 | 93.11 |
KXG36544 | Sorghum | cytosol | 97.67 | 93.11 |
Os07t0574800-02 | Rice | plasma membrane | 97.67 | 93.11 |
GSMUA_Achr2P12390_001 | Banana | cytosol, plasma membrane | 97.44 | 92.89 |
Zm00001d006651_P005 | Maize | plasma membrane | 97.2 | 92.67 |
GSMUA_Achr6P29670_001 | Banana | cytosol | 46.85 | 90.54 |
GSMUA_Achr7P17960_001 | Banana | cytosol | 83.68 | 90.43 |
HORVU2Hr1G037550.2 | Barley | cytosol | 90.44 | 85.84 |
CDY35856 | Canola | cytosol | 28.9 | 83.22 |
HORVU2Hr1G037570.3 | Barley | cytosol | 84.85 | 81.98 |
GSMUA_Achr6P00620_001 | Banana | cytosol | 62.24 | 81.16 |
GSMUA_Achr2P17250_001 | Banana | cytosol | 62.0 | 80.85 |
GSMUA_Achr7P08080_001 | Banana | cytosol | 58.04 | 79.3 |
GSMUA_Achr4P05450_001 | Banana | cytosol | 29.37 | 44.84 |
GSMUA_Achr8P33350_001 | Banana | cytosol | 29.6 | 42.05 |
GSMUA_Achr3P23490_001 | Banana | cytosol | 35.66 | 41.02 |
GSMUA_Achr6P08450_001 | Banana | cytosol | 36.83 | 40.83 |
GSMUA_Achr3P18460_001 | Banana | cytosol | 36.6 | 40.67 |
GSMUA_Achr6P04600_001 | Banana | cytosol | 39.86 | 40.43 |
GSMUA_Achr11P... | Banana | cytosol | 32.87 | 40.29 |
GSMUA_Achr10P... | Banana | cytosol | 40.09 | 40.28 |
GSMUA_Achr2P01410_001 | Banana | cytosol | 36.6 | 40.26 |
GSMUA_Achr5P00290_001 | Banana | cytosol | 36.83 | 40.2 |
GSMUA_Achr8P07060_001 | Banana | cytosol | 36.36 | 40.1 |
GSMUA_Achr5P26680_001 | Banana | cytosol | 36.13 | 39.95 |
GSMUA_Achr6P16040_001 | Banana | cytosol | 36.13 | 39.64 |
GSMUA_Achr4P11980_001 | Banana | plasma membrane | 40.56 | 39.01 |
GSMUA_AchrUn_... | Banana | cytosol | 33.1 | 39.01 |
GSMUA_Achr1P17290_001 | Banana | cytosol | 33.1 | 38.48 |
GSMUA_Achr4P26250_001 | Banana | cytosol | 39.16 | 37.67 |
GSMUA_Achr5P12310_001 | Banana | cytosol | 29.37 | 36.84 |
GSMUA_Achr6P19990_001 | Banana | cytosol | 34.73 | 35.99 |
GSMUA_Achr5P10720_001 | Banana | cytosol | 30.54 | 34.84 |
GSMUA_Achr5P21740_001 | Banana | cytosol | 40.09 | 34.19 |
GSMUA_Achr1P14750_001 | Banana | cytosol | 31.0 | 27.82 |
GSMUA_Achr11P... | Banana | cytosol | 0.7 | 25.0 |
Protein Annotations
MapMan:20.1.1.1 | Gene3D:3.30.1330.20 | Gene3D:3.40.50.1440 | InterPro:Alpha_tubulin | InterPro:Beta-tubulin_BS | ncoils:Coil |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005198 | GO:GO:0005200 |
GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
GO:GO:0005874 | GO:GO:0007010 | GO:GO:0007017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr5G14830_001 | EnsemblPlants:GSMUA_Achr5P14830_001 | EnsemblPlants:GSMUA_Achr5T14830_001 | InterPro:IPR036525 | InterPro:IPR037103 |
UniProt:M0SYL2 | PFAM:PF00091 | PFAM:PF03953 | PRINTS:PR01161 | PRINTS:PR01162 | ScanProsite:PS00227 |
ScanProsite:PS00228 | PANTHER:PTHR11588 | PANTHER:PTHR11588:SF48 | SMART:SM00864 | SMART:SM00865 | SUPFAM:SSF52490 |
SUPFAM:SSF55307 | InterPro:Tub_FtsZ_C | InterPro:Tubulin | InterPro:Tubulin/FtsZ_2-layer-sand-dom | InterPro:Tubulin/FtsZ_C_sf | InterPro:Tubulin/FtsZ_GTPase_sf |
InterPro:Tubulin_CS | InterPro:Tubulin_FtsZ_GTPase | UniParc:UPI0002950553 | SEG:seg | : | : |
Description
Tubulin alpha-3 chain [Source:GMGC_GENE;Acc:GSMUA_Achr5G14830_001]
Coordinates
chr5:+:10753981..10757214
Molecular Weight (calculated)
47201.1 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.115
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MREIISIHIG QAGIQVGNAC WELYCLEHGI QPDGIMPSDT SVGVASDAFN TFFSETGAGK HVPRAIFVDL EPTVIDEVRT GAYRQLFHPE QLISGKEDAA
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AYHEQLSVPE ITNAVFEPSS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVATIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KQDLAALEKD YEEVGAEGAD DEEDEPEDY
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AYHEQLSVPE ITNAVFEPSS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVATIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KQDLAALEKD YEEVGAEGAD DEEDEPEDY
001: MREIISIHIG QAGIQVGNSC WELYCLEHGI QPDGMMPSDT TVGVAHDAFN TFFSETGAGK HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLISGKEDAA
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DITEFQTNLV PYPRIHFMLS SYAPVISAAK AYHEQLSVPE ITNAVFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEEDEGEDY
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DITEFQTNLV PYPRIHFMLS SYAPVISAAK AYHEQLSVPE ITNAVFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEEDEGEDY
Arabidopsis Description
TUBA3Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:A0A178UTQ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.