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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P01800_001 Banana cytosol 93.24 98.77
GSMUA_Achr8P15410_001 Banana cytosol 52.91 95.38
TraesCS2D01G202200.1 Wheat cytosol 97.9 93.33
TraesCS2B01G221800.1 Wheat cytosol 97.9 93.33
TraesCS2A01G185500.2 Wheat cytosol 97.9 93.33
Zm00001d021891_P001 Maize cytosol 97.67 93.11
KXG36544 Sorghum cytosol 97.67 93.11
Os07t0574800-02 Rice plasma membrane 97.67 93.11
GSMUA_Achr2P12390_001 Banana cytosol, plasma membrane 97.44 92.89
Zm00001d006651_P005 Maize plasma membrane 97.2 92.67
GSMUA_Achr6P29670_001 Banana cytosol 46.85 90.54
GSMUA_Achr7P17960_001 Banana cytosol 83.68 90.43
HORVU2Hr1G037550.2 Barley cytosol 90.44 85.84
CDY35856 Canola cytosol 28.9 83.22
HORVU2Hr1G037570.3 Barley cytosol 84.85 81.98
GSMUA_Achr6P00620_001 Banana cytosol 62.24 81.16
GSMUA_Achr2P17250_001 Banana cytosol 62.0 80.85
GSMUA_Achr7P08080_001 Banana cytosol 58.04 79.3
GSMUA_Achr4P05450_001 Banana cytosol 29.37 44.84
GSMUA_Achr8P33350_001 Banana cytosol 29.6 42.05
GSMUA_Achr3P23490_001 Banana cytosol 35.66 41.02
GSMUA_Achr6P08450_001 Banana cytosol 36.83 40.83
GSMUA_Achr3P18460_001 Banana cytosol 36.6 40.67
GSMUA_Achr6P04600_001 Banana cytosol 39.86 40.43
GSMUA_Achr11P... Banana cytosol 32.87 40.29
GSMUA_Achr10P... Banana cytosol 40.09 40.28
GSMUA_Achr2P01410_001 Banana cytosol 36.6 40.26
GSMUA_Achr5P00290_001 Banana cytosol 36.83 40.2
GSMUA_Achr8P07060_001 Banana cytosol 36.36 40.1
GSMUA_Achr5P26680_001 Banana cytosol 36.13 39.95
GSMUA_Achr6P16040_001 Banana cytosol 36.13 39.64
GSMUA_Achr4P11980_001 Banana plasma membrane 40.56 39.01
GSMUA_AchrUn_... Banana cytosol 33.1 39.01
GSMUA_Achr1P17290_001 Banana cytosol 33.1 38.48
GSMUA_Achr4P26250_001 Banana cytosol 39.16 37.67
GSMUA_Achr5P12310_001 Banana cytosol 29.37 36.84
GSMUA_Achr6P19990_001 Banana cytosol 34.73 35.99
GSMUA_Achr5P10720_001 Banana cytosol 30.54 34.84
GSMUA_Achr5P21740_001 Banana cytosol 40.09 34.19
GSMUA_Achr1P14750_001 Banana cytosol 31.0 27.82
GSMUA_Achr11P... Banana cytosol 0.7 25.0
Protein Annotations
MapMan:20.1.1.1Gene3D:3.30.1330.20Gene3D:3.40.50.1440InterPro:Alpha_tubulinInterPro:Beta-tubulin_BSncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005198GO:GO:0005200
GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856
GO:GO:0005874GO:GO:0007010GO:GO:0007017GO:GO:0008150GO:GO:0009987GO:GO:0016043
GO:GO:0016787EnsemblPlantsGene:GSMUA_Achr5G14830_001EnsemblPlants:GSMUA_Achr5P14830_001EnsemblPlants:GSMUA_Achr5T14830_001InterPro:IPR036525InterPro:IPR037103
UniProt:M0SYL2PFAM:PF00091PFAM:PF03953PRINTS:PR01161PRINTS:PR01162ScanProsite:PS00227
ScanProsite:PS00228PANTHER:PTHR11588PANTHER:PTHR11588:SF48SMART:SM00864SMART:SM00865SUPFAM:SSF52490
SUPFAM:SSF55307InterPro:Tub_FtsZ_CInterPro:TubulinInterPro:Tubulin/FtsZ_2-layer-sand-domInterPro:Tubulin/FtsZ_C_sfInterPro:Tubulin/FtsZ_GTPase_sf
InterPro:Tubulin_CSInterPro:Tubulin_FtsZ_GTPaseUniParc:UPI0002950553SEG:seg::
Description
Tubulin alpha-3 chain [Source:GMGC_GENE;Acc:GSMUA_Achr5G14830_001]
Coordinates
chr5:+:10753981..10757214
Molecular Weight (calculated)
47201.1 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.115
Length
429 amino acids
Sequence
(BLAST)
001: MREIISIHIG QAGIQVGNAC WELYCLEHGI QPDGIMPSDT SVGVASDAFN TFFSETGAGK HVPRAIFVDL EPTVIDEVRT GAYRQLFHPE QLISGKEDAA
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AYHEQLSVPE ITNAVFEPSS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVATIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KQDLAALEKD YEEVGAEGAD DEEDEPEDY
Best Arabidopsis Sequence Match ( AT5G19770.1 )
(BLAST)
001: MREIISIHIG QAGIQVGNSC WELYCLEHGI QPDGMMPSDT TVGVAHDAFN TFFSETGAGK HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLISGKEDAA
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DITEFQTNLV PYPRIHFMLS SYAPVISAAK AYHEQLSVPE ITNAVFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEEDEGEDY
Arabidopsis Description
TUBA3Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:A0A178UTQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.