Factsheet for TraesCS2B01G221800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G202200.1	Wheat	cytosol	100.0	100.0
TraesCS2A01G185500.2	Wheat	cytosol	100.0	100.0
Zm00001d021891_P001	Maize	cytosol	98.89	98.89
KXG36544	Sorghum	cytosol	98.89	98.89
Os07t0574800-02	Rice	plasma membrane	98.67	98.67
Zm00001d006651_P005	Maize	plasma membrane	98.67	98.67
GSMUA_Achr5P14830_001	Banana	cytosol	93.33	97.9
VIT_06s0004g00480.t01	Wine grape	cytosol	97.11	97.33
GSMUA_Achr7P01800_001	Banana	cytosol	87.11	96.79
CDY35856	Canola	cytosol	32.0	96.64
PGSC0003DMT400010906	Potato	cytosol	96.22	96.44
TraesCS4B01G243100.1	Wheat	cytosol	92.44	92.65
TraesCS4B01G056700.1	Wheat	cytosol	92.67	92.46
HORVU2Hr1G037550.2	Barley	cytosol	92.22	91.81
TraesCS1B01G364500.3	Wheat	cytosol	92.0	91.8
TraesCS5B01G412700.1	Wheat	cytosol	91.78	91.57
HORVU2Hr1G037570.3	Barley	cytosol	86.89	88.06
TraesCS6B01G169300.1	Wheat	cytosol	41.78	42.34
TraesCS1B01G269400.1	Wheat	cytosol	41.78	42.25
TraesCS1B01G320800.1	Wheat	cytosol	41.56	41.83
TraesCS5B01G418700.1	Wheat	golgi	41.33	41.8
TraesCS4B01G366500.1	Wheat	cytosol	41.33	41.43
TraesCS3B01G363500.1	Wheat	golgi, unclear	41.11	41.39
TraesCS4B01G017100.1	Wheat	cytosol	40.0	40.45
TraesCS1B01G124800.1	Wheat	cytosol	30.67	29.42

Protein Annotations

Gene3D:1.10.287.600	MapMan:20.1.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	InterPro:Alpha_tubulin	InterPro:Beta-tubulin_BS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005198
GO:GO:0005200	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:IPR023123	InterPro:IPR036525	InterPro:IPR037103	PFAM:PF00091	PFAM:PF03953
PRINTS:PR01161	PRINTS:PR01162	ScanProsite:PS00227	ScanProsite:PS00228	PANTHER:PTHR11588	PANTHER:PTHR11588:SF48
SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	EnsemblPlantsGene:TraesCS2B01G221800	EnsemblPlants:TraesCS2B01G221800.1
InterPro:Tub_FtsZ_C	InterPro:Tubulin	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_C
InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	TIGR:cd02186	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:211624029..211627170

Molecular Weight (calculated)

49613.8 Da

IEP (calculated)

4.720

GRAVY (calculated)

-0.154

Length

450 amino acids

Sequence
(BLAST)

001: MREIISIHIG QAGIQVGNAC WELYCLEHGI QQDGTMPSDT TVGVAHDAFN TFFSETGAGK HVPRAIFVDL EPTVIDEVRT GAYRQLFHPE QLISGKEDAA
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AYHEQLSVPE ITNAVFEPSS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVATIKTKRT VQFVDWCPTG FKCGINYQPP SVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGA DDEGDEGDDY

Best Arabidopsis Sequence Match ( AT5G19770.1 )
(BLAST)

001: MREIISIHIG QAGIQVGNSC WELYCLEHGI QPDGMMPSDT TVGVAHDAFN TFFSETGAGK HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLISGKEDAA
101: NNFARGHYTV GKEIVDLCLD RVRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT IYPSPQVSTA VVEPYNSVLS THSLLEHTDV
201: AVLLDNEAIY DICRRSLDIE RPTYTNLNRL ISQIISSLTT SLRFDGAINV DITEFQTNLV PYPRIHFMLS SYAPVISAAK AYHEQLSVPE ITNAVFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT VQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN NTAVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEEDEGEDY

Arabidopsis Description

TUBA3Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:A0A178UTQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.