Factsheet for TraesCS5B01G412700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G407800.1	Wheat	golgi	100.0	100.0
TraesCS5D01G417700.1	Wheat	cytosol	99.56	99.56
TraesCS1B01G364500.3	Wheat	cytosol	96.23	96.23
TraesCS4B01G056700.1	Wheat	cytosol	95.79	95.79
KRH28301	Soybean	cytosol, endoplasmic reticulum	94.68	94.68
KRH77187	Soybean	endoplasmic reticulum	94.68	94.68
KRH58181	Soybean	nucleus	94.23	94.44
GSMUA_Achr7P17960_001	Banana	cytosol	82.71	93.95
EER93374	Sorghum	cytosol	92.24	92.44
Zm00001d013159_P001	Maize	cytosol	92.02	92.22
TraesCS2B01G221800.1	Wheat	cytosol	91.57	91.78
HORVU5Hr1G098960.2	Barley	cytosol, mitochondrion	99.78	90.36
TraesCS4B01G243100.1	Wheat	cytosol	87.8	88.2
TraesCS1B01G269400.1	Wheat	cytosol	42.13	42.7
TraesCS1B01G320800.1	Wheat	cytosol	42.13	42.51
TraesCS6B01G169300.1	Wheat	cytosol	41.69	42.34
TraesCS4B01G366500.1	Wheat	cytosol	42.13	42.32
TraesCS3B01G363500.1	Wheat	golgi, unclear	41.91	42.28
TraesCS4B01G017100.1	Wheat	cytosol	41.24	41.8
TraesCS5B01G418700.1	Wheat	golgi	41.24	41.8
TraesCS1B01G124800.1	Wheat	cytosol	31.26	30.06

Protein Annotations

Gene3D:1.10.287.600	MapMan:20.1.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	InterPro:Alpha_tubulin	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005198	GO:GO:0005200
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
InterPro:IPR023123	InterPro:IPR036525	InterPro:IPR037103	PFAM:PF00091	PFAM:PF03953	PRINTS:PR01161
PRINTS:PR01162	ScanProsite:PS00227	PANTHER:PTHR11588	PANTHER:PTHR11588:SF254	SMART:SM00864	SMART:SM00865
SUPFAM:SSF52490	SUPFAM:SSF55307	EnsemblPlantsGene:TraesCS5B01G412700	EnsemblPlants:TraesCS5B01G412700.1	InterPro:Tub_FtsZ_C	InterPro:Tubulin
InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_C	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase
TIGR:cd02186	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:587599856..587602012

Molecular Weight (calculated)

49789.7 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.224

Length

451 amino acids

Sequence
(BLAST)

001: MRECISIHIG QAGIQVGNAC WELYCLEHGI QPDGQTNGDK TIGGGDDAFN TFFSETGAGK YVPRAVFVDL EPTVIDEVRT SAYRQLFHPE QLISGKEDAA
101: NNFARGHYTI GKEIVDLCLD RIRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT VYPSPQVSTS VVEPYNSVLS THSLLEHTDV
201: SILLDNEAIY DICRRSLDIE RPTYTNLNRL VSQVISSLTT SLRFDGALNV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AYHEQLSVSE ITNSAFEPSS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVATIKTKRT IQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN STSVVEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEDGEEDDD Y

Best Arabidopsis Sequence Match ( AT1G04820.1 )
(BLAST)

001: MRECISIHIG QAGIQVGNAC WELYCLEHGI QPDGQMPSDK TVGGGDDAFN TFFSETGAGK HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLISGKEDAA
101: NNFARGHYTI GKEIVDLCLD RIRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT VYPSPQVSTS VVEPYNSVLS THSLLEHTDV
201: SILLDNEAIY DICRRSLSIE RPTYTNLNRL VSQVISSLTA SLRFDGALNV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AFHEQLSVAE ITNSAFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT IQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN STSVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEDDEGEEY

Arabidopsis Description

TUBA4Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:B9DGT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.