CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59870	Soybean	endoplasmic reticulum	97.53	97.31
VIT_02s0025g03540.t01	Wine grape	cytosol	93.71	93.92
GSMUA_AchrUn_...	Banana	cytosol	75.73	92.58
KRH58404	Soybean	nucleus	91.46	92.08
GSMUA_Achr5P12310_001	Banana	cytosol	70.56	91.81
KRH42279	Soybean	cytosol	91.01	91.42
GSMUA_Achr4P26250_001	Banana	cytosol	91.46	91.26
KRH36829	Soybean	nucleus	91.24	91.03
KRH11812	Soybean	nucleus	91.24	91.03
KRG95065	Soybean	plasma membrane	91.46	90.44
KRH05958	Soybean	nucleus	91.24	90.42
KRH66728	Soybean	nucleus	91.01	90.2
KRH35301	Soybean	nucleus	90.79	90.18
KRH51701	Soybean	nucleus	90.79	90.18
KRG91525	Soybean	nucleus	90.79	90.18
KRH61035	Soybean	nucleus	90.79	89.98
Zm00001d033457_P001	Maize	plasma membrane	89.89	89.89
Os03t0661300-01	Rice	plasma membrane	89.66	89.46
TraesCS4A01G296600.1	Wheat	cytosol	89.44	89.44
TraesCS4D01G015400.1	Wheat	cytosol	89.44	89.44
KRH41834	Soybean	cytosol	89.44	89.44
EER93713	Sorghum	cytosol	89.44	89.44
TraesCS4B01G017100.1	Wheat	cytosol	89.21	89.21
KRH65977	Soybean	nucleus	89.89	89.09
KRH17435	Soybean	nucleus	91.46	89.06
Zm00001d013612_P002	Maize	plasma membrane	89.44	89.04
KRH75786	Soybean	nucleus	89.66	88.86
KRH60536	Soybean	endoplasmic reticulum	88.76	88.76
CDX68422	Canola	cytosol	57.08	88.5
GSMUA_Achr5P10720_001	Banana	cytosol	74.61	88.3
HORVU4Hr1G002530.2	Barley	cytosol	89.21	80.69
HORVU4Hr1G087740.1	Barley	cytosol	70.34	66.74
Zm00001d026623_P001	Maize	cytosol, plastid	46.07	49.4
KRH04356	Soybean	cytosol	25.17	44.62
KRH35640	Soybean	cytosol, nucleus	41.12	40.76
KRH77187	Soybean	endoplasmic reticulum	41.12	40.58
KRH28301	Soybean	cytosol, endoplasmic reticulum	41.12	40.58
KRG91143	Soybean	nucleus	40.9	40.53
KRH58942	Soybean	nucleus	40.45	40.09
KRH42841	Soybean	cytosol, nucleus	40.45	40.0
KRH06693	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	39.78	39.95
KRH08505	Soybean	cytosol, endoplasmic reticulum, nucleus	39.78	39.86
KRH62139	Soybean	nucleus	40.45	39.82
KRH52851	Soybean	cytosol, nucleus	40.45	39.82
KRH58181	Soybean	nucleus	40.22	39.78
KRG94842	Soybean	cytosol, endoplasmic reticulum, mitochondrion	40.0	39.47
KRG97131	Soybean	cytosol	35.28	33.12
KRH68880	Soybean	endoplasmic reticulum	35.28	33.12
KRH04357	Soybean	cytosol	12.58	32.94

Protein Annotations

Gene3D:1.10.287.600	EntrezGene:100776983	MapMan:20.1.1.2	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	EMBL:ACUP02004752
InterPro:Beta-tubulin_BS	InterPro:Beta_tubulin	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G014200	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005198	GO:GO:0005200	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874
GO:GO:0007010	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
UniProt:I1KPA1	InterPro:IPR023123	InterPro:IPR036525	InterPro:IPR037103	EnsemblPlants:KRH41169	ProteinID:KRH41169
ProteinID:KRH41169.1	PFAM:PF00091	PFAM:PF03953	PRINTS:PR01161	PRINTS:PR01163	ScanProsite:PS00227
ScanProsite:PS00228	PANTHER:PTHR11588	PANTHER:PTHR11588:SF124	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490
SUPFAM:SSF55307	InterPro:Tub_FtsZ_C	InterPro:Tubulin	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf
InterPro:Tubulin_C	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0002338139	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:1100379..1102829

Molecular Weight (calculated)

50010.3 Da

IEP (calculated)

4.641

GRAVY (calculated)

-0.337

Length

445 amino acids

Sequence
(BLAST)

001: MREILHVQAG QCGNQIGGKF WEVMCDEHGI DATGNYVGNF HLQLERVNVY YNEASGGRYV PRAVLMDLEP GTMDSLRSGP FGKIFRPDNF VFGQNGAGNN
101: WAKGHYTEGA ELIDSVLDVV RKEAENCDCL QGFQICHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV EPYNATLSVH QLVENADECM
201: VLDNEALYDI CFRTLKLTNP SFGDLNHLIS TTMSGVTCCL RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRSLTIPELT QQMWDARNMM
301: CAADPRHGRY LTASAMFRGK MSTKEVDQQM INVQNKNSSY FVEWIPNNVK SSVCDIPPTG LSMSSTFMGN STSIQEMFRR VSEQFTVMFK RKAFLHWYTG
401: EGMDEMEFTE AESNMNDLVA EYQQYQDATA VDDHEDEDED EAMAA

Best Arabidopsis Sequence Match ( AT5G12250.1 )
(BLAST)

001: MREILHIQGG QCGNQIGSKF WEVVCDEHGI DPTGRYVGNS DLQLERVNVY YNEASCGRYV PRAILMDLEP GTMDSVRTGP YGQIFRPDNF VFGQSGAGNN
101: WAKGHYTEGA ELIDAVLDVV RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV EPYNATLSVH QLVENADECM
201: VLDNEALYDI CFRTLKLTTP SFGDLNHLIS ATMSGVTCCL RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRALTVPELT QQMWDSKNMM
301: CAADPRHGRY LTASAMFRGK MSTKEVDEQM INVQNKNSSY FVEWIPNNVK SSVCDIAPRG LSMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG
401: EGMDEMEFTE AESNMNDLVS EYQQYQDATA DDEGEYEEDE DEEEILDHE

Arabidopsis Description

TUBB6Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UPR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.