Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58181 | Soybean | nucleus | 98.82 | 37.33 |
| KRH77187 | Soybean | endoplasmic reticulum | 94.12 | 35.48 |
| KRH28301 | Soybean | cytosol, endoplasmic reticulum | 93.53 | 35.26 |
| KRG91143 | Soybean | nucleus | 91.76 | 34.74 |
| KRH35640 | Soybean | cytosol, nucleus | 91.76 | 34.74 |
| KRH62139 | Soybean | nucleus | 92.35 | 34.73 |
| KRH52851 | Soybean | cytosol, nucleus | 91.76 | 34.51 |
| KRH58942 | Soybean | nucleus | 90.0 | 34.08 |
| KRH42841 | Soybean | cytosol, nucleus | 90.0 | 34.0 |
| KRG94842 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 87.06 | 32.82 |
| KRH06693 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 85.29 | 32.73 |
| KRH08505 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.35 | 31.53 |
| PGSC0003DMT400077781 | Potato | cytosol | 47.65 | 19.71 |
| PGSC0003DMT400046148 | Potato | cytosol | 46.47 | 18.24 |
| KRH11812 | Soybean | nucleus | 35.88 | 13.68 |
| KRH51701 | Soybean | nucleus | 35.88 | 13.62 |
| KRH61035 | Soybean | nucleus | 35.88 | 13.59 |
| KRH75786 | Soybean | nucleus | 35.88 | 13.59 |
| KRH58404 | Soybean | nucleus | 35.29 | 13.57 |
| KRH36829 | Soybean | nucleus | 35.29 | 13.45 |
| KRH65977 | Soybean | nucleus | 35.29 | 13.36 |
| KRG95065 | Soybean | plasma membrane | 35.29 | 13.33 |
| KRH42279 | Soybean | cytosol | 34.71 | 13.32 |
| KRH59870 | Soybean | endoplasmic reticulum | 34.71 | 13.23 |
| KRH05958 | Soybean | nucleus | 34.71 | 13.14 |
| KRH66728 | Soybean | nucleus | 34.71 | 13.14 |
| KRH41834 | Soybean | cytosol | 33.53 | 12.81 |
| KRH35301 | Soybean | nucleus | 33.53 | 12.72 |
| KRG91525 | Soybean | nucleus | 33.53 | 12.72 |
| KRH17435 | Soybean | nucleus | 34.12 | 12.69 |
| KRH41169 | Soybean | cytosol | 32.94 | 12.58 |
| KRH60536 | Soybean | endoplasmic reticulum | 32.94 | 12.58 |
| KRH68880 | Soybean | endoplasmic reticulum | 18.82 | 6.75 |
| KRG97131 | Soybean | cytosol | 18.82 | 6.75 |
| GSMUA_Achr8P15410_001 | Banana | cytosol | 0.59 | 0.42 |
| PGSC0003DMT400012732 | Potato | cytosol | 0.59 | 0.4 |
| GSMUA_Achr6P29670_001 | Banana | cytosol | 0.0 | 0.0 |
| KRH04356 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.287.600 | Gene3D:3.30.1330.20 | MapMan:35.1 | UniProt:A0A0R0FP38 | EMBL:ACUP02010405 | InterPro:Alpha_tubulin |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_17G1569001 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005200 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005874 | GO:GO:0007010 | GO:GO:0007017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:IPR023123 | InterPro:IPR037103 | EnsemblPlants:KRH04357 | ProteinID:KRH04357 | ProteinID:KRH04357.1 | PFAM:PF03953 |
| PRINTS:PR01162 | PANTHER:PTHR11588 | PANTHER:PTHR11588:SF254 | SMART:SM00865 | SUPFAM:SSF55307 | InterPro:Tub_FtsZ_C |
| InterPro:Tubulin | InterPro:Tubulin/FtsZ_2-layer-sand-dom | InterPro:Tubulin/FtsZ_C_sf | InterPro:Tubulin_C | UniParc:UPI0006ED4DB1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:13364489..13365001
Molecular Weight (calculated)
18929.3 Da
IEP (calculated)
4.470
GRAVY (calculated)
-0.370
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: AHHEQLSVGE ITNSAFEPSS MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGIIKTKRT IQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN
101: STSVVEVFSR IDHKFDLMYA KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEAT EEDGDEGEDY
101: STSVVEVFSR IDHKFDLMYA KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEAT EEDGDEGEDY
001: MRECISIHIG QAGIQVGNAC WELYCLEHGI QPDGQMPSDK TVGGGDDAFN TFFSETGAGK HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLISGKEDAA
101: NNFARGHYTI GKEIVDLCLD RIRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT VYPSPQVSTS VVEPYNSVLS THSLLEHTDV
201: SILLDNEAIY DICRRSLSIE RPTYTNLNRL VSQVISSLTA SLRFDGALNV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AFHEQLSVAE ITNSAFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT IQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN STSVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEDDEGEEY
101: NNFARGHYTI GKEIVDLCLD RIRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT VYPSPQVSTS VVEPYNSVLS THSLLEHTDV
201: SILLDNEAIY DICRRSLSIE RPTYTNLNRL VSQVISSLTA SLRFDGALNV DVTEFQTNLV PYPRIHFMLS SYAPVISAEK AFHEQLSVAE ITNSAFEPAS
301: MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVGTIKTKRT IQFVDWCPTG FKCGINYQPP TVVPGGDLAK VQRAVCMISN STSVAEVFSR IDHKFDLMYA
401: KRAFVHWYVG EGMEEGEFSE AREDLAALEK DYEEVGAEGG DDEDDEGEEY
Arabidopsis Description
TUBA4Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:B9DGT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.