Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G358400.1 | Wheat | nucleus | 79.17 | 78.62 |
| Os01t0840300-00 | Rice | cytosol, mitochondrion, nucleus | 17.71 | 78.46 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 73.96 | 77.74 |
| TraesCS3A01G358100.1 | Wheat | nucleus | 76.74 | 73.42 |
| TraesCS5A01G085000.1 | Wheat | nucleus | 51.74 | 46.86 |
| Zm00001d042920_P001 | Maize | nucleus | 35.76 | 31.79 |
| OQU87830 | Sorghum | nucleus | 36.46 | 30.88 |
| Zm00001d012419_P001 | Maize | nucleus | 34.72 | 29.15 |
| TraesCS5A01G157300.1 | Wheat | nucleus | 21.53 | 25.73 |
| TraesCS2A01G514000.1 | Wheat | plastid | 18.75 | 23.08 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 17.71 | 19.39 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 13.19 | 17.92 |
| TraesCS2A01G491900.1 | Wheat | mitochondrion, plastid | 15.28 | 14.29 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 12.5 | 13.58 |
| TraesCS2A01G100700.1 | Wheat | nucleus | 11.46 | 12.45 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 10.42 | 11.54 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 11.81 | 11.07 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 13.54 | 8.02 |
| TraesCS3A01G247200.1 | Wheat | nucleus, plastid | 13.89 | 7.77 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G358200.1 | EnsemblPlantsGene:TraesCS3A01G358200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | MapMan:15.5.3.6 |
Description
No Description!
Coordinates
chr3A:-:606515871..606519197
Molecular Weight (calculated)
31988.9 Da
IEP (calculated)
10.051
GRAVY (calculated)
-0.645
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MENAEHHDGA ITILSLSPPP TSAALSPPIS HNSAALANAR WVPTREQIAL LEGLYRQGMR TPTAKEIHQV TARLQEHGPI EGKNVFYWFQ NRLRQKQKQQ
101: QRSDYFARQL RRPQPLPTLR RTPGHAFSPV QLQAPPAPNT PACNGEAMYM QQPCYMSGSA AQDTANATYY SQMQPQIMYP SAEMMAHGNV QAQAQAAMYY
201: QAASPNNSNT QQLRILQCPP AAGSYGAPDA YSHRPVLLNL FPQYPSFANR RKTRRVGSVG SVRPSTSGSI SWETESPKIP NRHIAIDL
101: QRSDYFARQL RRPQPLPTLR RTPGHAFSPV QLQAPPAPNT PACNGEAMYM QQPCYMSGSA AQDTANATYY SQMQPQIMYP SAEMMAHGNV QAQAQAAMYY
201: QAASPNNSNT QQLRILQCPP AAGSYGAPDA YSHRPVLLNL FPQYPSFANR RKTRRVGSVG SVRPSTSGSI SWETESPKIP NRHIAIDL
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.