Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G373800.1 | Wheat | nucleus | 96.6 | 98.08 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 91.7 | 92.4 |
| TraesCSU01G204800.1 | Wheat | nucleus | 52.83 | 89.74 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 89.06 | 88.06 |
| Os01t0818400-01 | Rice | nucleus | 78.87 | 78.28 |
| EES01660 | Sorghum | nucleus | 73.96 | 70.5 |
| Zm00001d043076_P001 | Maize | nucleus | 72.08 | 69.96 |
| Zm00001d012516_P001 | Maize | nucleus | 69.06 | 64.89 |
| KRH60910 | Soybean | nucleus | 46.04 | 58.65 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 52.08 | 57.74 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 49.81 | 55.93 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 44.15 | 55.45 |
| KRH51590 | Soybean | nucleus | 45.66 | 55.25 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 57.36 | 54.48 |
| CDY01358 | Canola | nucleus | 26.79 | 53.38 |
| Bra012245.1-P | Field mustard | nucleus | 26.79 | 53.38 |
| PGSC0003DMT400003980 | Potato | nucleus | 53.21 | 51.27 |
| Solyc02g082670.2.1 | Tomato | nucleus | 52.83 | 51.09 |
| KRH01611 | Soybean | nucleus | 47.92 | 47.74 |
| KRH36192 | Soybean | nucleus | 50.19 | 47.33 |
| KRH70496 | Soybean | nucleus | 46.42 | 46.95 |
| KRG90565 | Soybean | nucleus | 47.92 | 44.72 |
| AT1G20710.1 | Thale cress | nucleus | 30.94 | 41.62 |
| Bra025839.1-P | Field mustard | nucleus | 31.32 | 40.89 |
| CDY29511 | Canola | nucleus | 31.32 | 40.89 |
| CDX93197 | Canola | nucleus | 29.81 | 40.51 |
| CDY31870 | Canola | nucleus | 29.81 | 40.51 |
| CDY65899 | Canola | nucleus | 31.7 | 40.19 |
| AT1G20700.1 | Thale cress | nucleus | 30.94 | 38.86 |
| TraesCS2A01G514000.1 | Wheat | plastid | 14.34 | 16.24 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 15.85 | 16.15 |
| TraesCS2A01G100700.1 | Wheat | nucleus | 15.85 | 15.85 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 12.08 | 15.09 |
| TraesCS5A01G157300.1 | Wheat | nucleus | 12.83 | 14.11 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 13.58 | 13.69 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 15.85 | 13.68 |
| TraesCS3A01G358100.1 | Wheat | nucleus | 14.72 | 12.96 |
| TraesCS5A01G085000.1 | Wheat | nucleus | 15.09 | 12.58 |
| TraesCS3A01G358200.1 | Wheat | nucleus | 13.58 | 12.5 |
| TraesCS2A01G491900.1 | Wheat | mitochondrion, plastid | 14.34 | 12.34 |
| TraesCS3A01G358400.1 | Wheat | nucleus | 12.08 | 11.03 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 14.72 | 8.02 |
| TraesCS3A01G247200.1 | Wheat | nucleus, plastid | 15.47 | 7.96 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G341700.1 | EnsemblPlantsGene:TraesCS3A01G341700 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | TIGR:cd00086 |
| MapMan:15.5.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:588933879..588936695
Molecular Weight (calculated)
29598.5 Da
IEP (calculated)
6.104
GRAVY (calculated)
-0.839
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDKASAAA AAAAVAGEPA EERGEALGYV KVMTDEQMEV LRKQISIYAT ICEQLVEMHR ALTAHQDSIA GMRLGNLYCD PLMVHGGHKI TARQRWTPTQ
101: MQLQILESIF DQGNGTPSKQ KIKDITAELS QHGQISETNV YNWFQNRRAR SKRKQAASSL PSNTESEAEG DEDSPTDKKP RSDGSQQQGM AVRAHNPERI
201: SEMHRHFDAA EREQVRGPMY GSSNDNGPRP SGGLGQMSFY ENVMSNPRID QFFQYRTGES FDMSG
101: MQLQILESIF DQGNGTPSKQ KIKDITAELS QHGQISETNV YNWFQNRRAR SKRKQAASSL PSNTESEAEG DEDSPTDKKP RSDGSQQQGM AVRAHNPERI
201: SEMHRHFDAA EREQVRGPMY GSSNDNGPRP SGGLGQMSFY ENVMSNPRID QFFQYRTGES FDMSG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.