Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01660 | Sorghum | nucleus | 93.04 | 91.37 |
| Zm00001d012516_P001 | Maize | nucleus | 85.71 | 82.98 |
| Os01t0818400-01 | Rice | nucleus | 75.82 | 77.53 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 69.96 | 72.08 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 68.86 | 72.03 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 68.86 | 70.15 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 67.4 | 69.96 |
| TraesCSU01G204800.1 | Wheat | nucleus | 39.56 | 69.23 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 27.47 | 57.69 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 58.61 | 57.35 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 50.18 | 57.32 |
| KRH60910 | Soybean | nucleus | 43.59 | 57.21 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 49.08 | 56.78 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 41.76 | 54.03 |
| KRH51590 | Soybean | nucleus | 42.86 | 53.42 |
| Solyc02g082670.2.1 | Tomato | nucleus | 52.38 | 52.19 |
| Bra012245.1-P | Field mustard | nucleus | 25.27 | 51.88 |
| CDY01358 | Canola | nucleus | 25.27 | 51.88 |
| PGSC0003DMT400003980 | Potato | nucleus | 52.01 | 51.64 |
| KRH01611 | Soybean | nucleus | 47.62 | 48.87 |
| KRH70496 | Soybean | nucleus | 45.05 | 46.95 |
| KRH36192 | Soybean | nucleus | 47.62 | 46.26 |
| KRG90565 | Soybean | nucleus | 46.15 | 44.37 |
| AT1G20710.1 | Thale cress | nucleus | 30.4 | 42.13 |
| CDY29511 | Canola | nucleus | 30.4 | 40.89 |
| Bra025839.1-P | Field mustard | nucleus | 30.4 | 40.89 |
| CDY31870 | Canola | nucleus | 28.94 | 40.51 |
| CDX93197 | Canola | nucleus | 28.94 | 40.51 |
| CDY65899 | Canola | nucleus | 30.77 | 40.19 |
| AT1G20700.1 | Thale cress | nucleus | 30.4 | 39.34 |
| Zm00001d037309_P001 | Maize | nucleus | 8.06 | 17.46 |
| Zm00001d022524_P001 | Maize | nucleus | 14.65 | 15.44 |
| Zm00001d010998_P001 | Maize | nucleus | 12.09 | 15.0 |
| Zm00001d042821_P001 | Maize | nucleus | 11.72 | 14.48 |
| Zm00001d012330_P001 | Maize | nucleus | 12.09 | 14.04 |
| Zm00001d026453_P001 | Maize | plastid | 12.45 | 13.6 |
| Zm00001d024410_P001 | Maize | nucleus | 14.29 | 13.27 |
| Zm00001d035535_P001 | Maize | nucleus | 12.45 | 13.18 |
| Zm00001d028986_P001 | Maize | nucleus | 14.65 | 12.38 |
| Zm00001d047559_P001 | Maize | nucleus | 14.29 | 12.38 |
| Zm00001d004889_P001 | Maize | nucleus | 11.72 | 12.21 |
| Zm00001d052598_P001 | Maize | nucleus | 11.72 | 12.08 |
| Zm00001d001948_P001 | Maize | nucleus, plastid | 13.19 | 11.25 |
| Zm00001d026537_P001 | Maize | plastid | 12.82 | 10.77 |
| Zm00001d042920_P001 | Maize | nucleus | 12.09 | 10.19 |
| Zm00001d012419_P001 | Maize | nucleus | 12.45 | 9.91 |
| Zm00001d039017_P001 | Maize | nucleus | 14.65 | 8.11 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103651072 | MapMan:15.5.3.6 | EMBL:BT063919 | UniProt:C0P6K0 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | EMBL:KJ726947 | ProteinID:ONM36862.1 |
| PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI000160BAD4 | EnsemblPlantsGene:Zm00001d043076 | EnsemblPlants:Zm00001d043076_P001 | EnsemblPlants:Zm00001d043076_T001 | SEG:seg | : |
Description
Homeobox-transcription factor 88WUSCHEL-related homeobox 13
Coordinates
chr3:-:188444921..188448749
Molecular Weight (calculated)
30389.6 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.748
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWVDRTKAS AAAAAAAADE RAGGAEGLAG YVKVMTDEQM EVLRKQISIY ATICEQLVEM HRALTEHQDT IAGIRFSNLY CDPQIIPGGH KITARQRWQP
101: TPMQLQILEN IFDQGNGTPS KQRIKEITAE LSHHGQISET NVYNWFQNRR ARSKRKQAAS LPNNAESEAE VDEESLTDKK PKSDRSLQDN KAMGAHNADR
201: ISGMHHLDTD HDQIGGMMYG CNDNGLRSSG SSGQMSFYGN IMPNPRIDHF PGKVESSRSF SHLQHGEGFD MFG
101: TPMQLQILEN IFDQGNGTPS KQRIKEITAE LSHHGQISET NVYNWFQNRR ARSKRKQAAS LPNNAESEAE VDEESLTDKK PKSDRSLQDN KAMGAHNADR
201: ISGMHHLDTD HDQIGGMMYG CNDNGLRSSG SSGQMSFYGN IMPNPRIDHF PGKVESSRSF SHLQHGEGFD MFG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.