Factsheet for Zm00001d035535_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77281	Sorghum	mitochondrion, nucleus	90.31	85.66
Zm00001d010998_P001	Maize	nucleus	71.71	84.09
VIT_06s0004g03780.t01	Wine grape	nucleus	31.01	60.61
TraesCS1A01G052000.1	Wheat	nucleus, plastid	58.91	57.79
TraesCS1B01G069000.1	Wheat	nucleus, plastid	58.53	57.2
Os05t0118700-00	Rice	nucleus	63.18	56.99
TraesCS1D01G054000.1	Wheat	nucleus	58.14	56.18
HORVU1Hr1G010580.2	Barley	nucleus, plastid	56.98	52.31
PGSC0003DMT400016896	Potato	mitochondrion	21.71	50.91
Zm00001d004889_P001	Maize	nucleus	39.53	38.93
GSMUA_Achr5P29220_001	Banana	nucleus	29.84	38.5
Zm00001d052598_P001	Maize	nucleus	38.76	37.74
Solyc11g072770.1.1	Tomato	mitochondrion, nucleus	27.91	36.55
PGSC0003DMT400065247	Potato	mitochondrion	28.29	36.5
KRG99904	Soybean	nucleus	29.46	36.19
CDX95764	Canola	nucleus	30.62	35.59
CDY31716	Canola	nucleus	32.17	35.47
Bra035688.1-P	Field mustard	nucleus	32.17	35.47
CDX83299	Canola	nucleus	31.01	35.4
Bra000484.1-P	Field mustard	nucleus	31.01	35.4
KRH49082	Soybean	nucleus	28.68	35.24
Solyc11g072790.1.1	Tomato	nucleus	28.29	34.93
CDX77191	Canola	nucleus	31.78	34.75
AT2G28610.1	Thale cress	nucleus	31.78	33.61
Zm00001d037309_P001	Maize	nucleus	13.95	28.57
Zm00001d042821_P001	Maize	nucleus	20.16	23.53
Zm00001d012330_P001	Maize	nucleus	21.32	23.4
Zm00001d026453_P001	Maize	plastid	20.93	21.6
Zm00001d012419_P001	Maize	nucleus	27.13	20.41
Zm00001d042920_P001	Maize	nucleus	25.58	20.37
Zm00001d001948_P001	Maize	nucleus, plastid	23.26	18.75
Zm00001d026537_P001	Maize	plastid	22.09	17.54
Zm00001d022524_P001	Maize	nucleus	14.73	14.67
Zm00001d012516_P001	Maize	nucleus	14.34	13.12
Zm00001d043076_P001	Maize	nucleus	13.18	12.45
Zm00001d028986_P001	Maize	nucleus	14.73	11.76
Zm00001d047559_P001	Maize	nucleus	14.34	11.75
Zm00001d024410_P001	Maize	nucleus	12.79	11.22
Zm00001d039017_P001	Maize	nucleus	16.67	8.72

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100127511	MapMan:15.5.3.6	UniProt:A8Y7V7	EMBL:AM490236	ProteinID:AQK79187.1
EMBL:BT040184	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
EMBL:KJ726946	PFAM:PF00046	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF115	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI00015EEACB	EnsemblPlantsGene:Zm00001d035535	EnsemblPlants:Zm00001d035535_P001	EnsemblPlants:Zm00001d035535_T001	SEG:seg

Description

WUSCHEL homeobox 3AWUSCHEL-related homeobox 3

Coordinates

chr6:+:31587838..31589288

Molecular Weight (calculated)

27467.5 Da

IEP (calculated)

7.581

GRAVY (calculated)

-0.235

Length

258 amino acids

Sequence
(BLAST)

001: MPSQQQQQQG QQVAAGSTRW CPTPEQLMIL EDMYRGGLRT PNASQIQQIT AHLACYGRIE GKNVFYWFQN HKARDRQKMR RRLCMSHHLL SCAQYYAAAA
101: HHGHAAFLAA PPPYGHQLLS PSTTSPTPAA AAAAAAAAYG YYYPATAAFA APASRCAGNA TPPSPTTQLF HYQGGGGLVP TEALGRPEYS LGKLDNFGVA
201: LDDVVVSSTS GAVVDTMGAP PVAGFEVAPP LPAAFSCRPL KTLDLFPGGL EEEQHDVA

Best Arabidopsis Sequence Match ( AT2G28610.1 )
(BLAST)

001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL

Arabidopsis Description

WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.