Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035688.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX77191 | Canola | nucleus | 95.3 | 94.49 |
| CDX83299 | Canola | nucleus | 82.91 | 85.84 |
| CDX95764 | Canola | nucleus | 80.77 | 85.14 |
| AT2G28610.1 | Thale cress | nucleus | 85.04 | 81.56 |
| VIT_06s0004g03780.t01 | Wine grape | nucleus | 32.91 | 58.33 |
| PGSC0003DMT400016896 | Potato | mitochondrion | 20.94 | 44.55 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 35.04 | 41.0 |
| KRG99904 | Soybean | nucleus | 35.04 | 39.05 |
| KRH49082 | Soybean | nucleus | 34.62 | 38.57 |
| Solyc11g072790.1.1 | Tomato | nucleus | 32.91 | 36.84 |
| Zm00001d010998_P001 | Maize | nucleus | 34.62 | 36.82 |
| PGSC0003DMT400065247 | Potato | mitochondrion | 30.34 | 35.5 |
| Solyc11g072770.1.1 | Tomato | mitochondrion, nucleus | 29.49 | 35.03 |
| CDY02582 | Canola | nucleus | 17.52 | 33.88 |
| Zm00001d035535_P001 | Maize | nucleus | 35.47 | 32.17 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 36.75 | 31.62 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 35.9 | 31.46 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 35.04 | 31.18 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 35.04 | 31.06 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 34.62 | 28.83 |
| Os05t0118700-00 | Rice | nucleus | 34.62 | 28.32 |
| CDY70975 | Canola | nucleus | 19.23 | 27.11 |
| CDY71075 | Canola | nucleus | 13.68 | 26.45 |
| CDY01007 | Canola | nucleus | 20.94 | 25.65 |
| CDY08539 | Canola | nucleus | 20.51 | 25.13 |
| CDX70130 | Canola | nucleus | 19.23 | 23.44 |
| CDX98862 | Canola | nucleus | 19.23 | 23.44 |
| CDY14103 | Canola | nucleus | 18.8 | 23.04 |
| CDY04966 | Canola | nucleus | 18.38 | 22.51 |
| CDY40847 | Canola | nucleus | 23.5 | 21.57 |
| CDY43848 | Canola | nucleus | 23.08 | 21.51 |
| CDY17046 | Canola | nucleus | 23.5 | 21.48 |
| CDY25659 | Canola | nucleus | 22.65 | 21.12 |
| CDX81686 | Canola | nucleus | 24.79 | 20.0 |
| CDY32648 | Canola | nucleus | 14.53 | 19.43 |
| CDY41086 | Canola | nucleus | 21.79 | 19.1 |
| CDY33728 | Canola | nucleus | 22.22 | 18.91 |
| CDX80277 | Canola | nucleus | 16.67 | 18.57 |
| CDY33030 | Canola | nucleus | 16.67 | 18.57 |
| CDY01358 | Canola | nucleus | 10.26 | 18.05 |
| CDY55370 | Canola | nucleus | 23.08 | 17.88 |
| CDY29212 | Canola | nucleus | 22.22 | 17.69 |
| CDY02885 | Canola | nucleus | 14.96 | 17.59 |
| CDY47803 | Canola | nucleus | 22.65 | 17.55 |
| CDY38144 | Canola | nucleus | 22.65 | 17.55 |
| CDY30337 | Canola | nucleus | 23.5 | 17.41 |
| CDX93197 | Canola | nucleus | 13.68 | 16.41 |
| CDY31870 | Canola | nucleus | 13.68 | 16.41 |
| CDX92182 | Canola | nucleus | 23.93 | 15.95 |
| CDY66658 | Canola | nucleus | 23.93 | 15.95 |
| CDY51928 | Canola | nucleus | 23.93 | 15.86 |
| CDY41648 | Canola | nucleus | 11.54 | 15.79 |
| CDY29511 | Canola | nucleus | 13.68 | 15.76 |
| CDX75955 | Canola | nucleus | 23.5 | 15.71 |
| CDY65899 | Canola | nucleus | 13.25 | 14.83 |
| CDY72488 | Canola | nucleus, plastid | 14.1 | 13.36 |
| CDX72546 | Canola | nucleus | 14.53 | 13.03 |
| CDX75511 | Canola | nucleus | 14.1 | 12.89 |
| CDY38461 | Canola | nucleus | 14.96 | 12.77 |
| CDY16883 | Canola | nucleus | 14.96 | 12.68 |
| CDX69148 | Canola | nucleus | 14.1 | 12.45 |
| CDX87744 | Canola | nucleus | 16.67 | 12.19 |
| CDY48780 | Canola | nucleus | 16.67 | 12.19 |
| CDY40623 | Canola | nucleus | 13.68 | 12.17 |
| CDY66087 | Canola | nucleus | 14.53 | 12.14 |
| CDY02686 | Canola | nucleus | 14.53 | 12.01 |
| CDY24814 | Canola | nucleus | 11.54 | 11.3 |
| CDY21173 | Canola | nucleus | 13.25 | 10.73 |
| CDY29949 | Canola | nucleus | 13.25 | 10.73 |
| CDY51756 | Canola | plastid | 13.25 | 9.51 |
| CDY17211 | Canola | nucleus | 15.38 | 9.23 |
| CDY69228 | Canola | nucleus | 15.38 | 9.23 |
| CDY50656 | Canola | nucleus | 13.25 | 9.14 |
| CDX79549 | Canola | nucleus | 14.53 | 8.56 |
| CDY29211 | Canola | mitochondrion | 3.85 | 6.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078H1Q6 | UniProt:A0A078H1Q6 | EnsemblPlants:CDY31716 | ProteinID:CDY31716 |
| ProteinID:CDY31716.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00050347001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF115 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0002544034 | SEG:seg | : | : | : |
Description
BnaA04g16520DBnaA04g16520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1Q6]
Coordinates
chrLK032278:+:14950..16037
Molecular Weight (calculated)
27144.8 Da
IEP (calculated)
9.505
GRAVY (calculated)
-0.669
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVAATRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HHLQLQLQHI QPNPISQPLS
101: NIIDPHNHYH HHYNHHRPYD HMSFACCSQP SPICLSHQAI GVEAQSKVLS EHYCNKSGRE DMLMQKPITG QNTSYGRDWM MMMMDMGPRP SYPSSSSVPV
201: PYCNMMMNSP KIPLKTLELF PISSINSKQD SSKL
101: NIIDPHNHYH HHYNHHRPYD HMSFACCSQP SPICLSHQAI GVEAQSKVLS EHYCNKSGRE DMLMQKPITG QNTSYGRDWM MMMMDMGPRP SYPSSSSVPV
201: PYCNMMMNSP KIPLKTLELF PISSINSKQD SSKL
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Arabidopsis Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.