Factsheet for TraesCS1B01G069000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G052000.1	Wheat	nucleus, plastid	96.21	96.58
TraesCS1D01G054000.1	Wheat	nucleus	95.83	94.76
HORVU1Hr1G010580.2	Barley	nucleus, plastid	88.26	82.92
Zm00001d035535_P001	Maize	nucleus	57.2	58.53
VIT_06s0004g03780.t01	Wine grape	nucleus	29.17	58.33
OQU77281	Sorghum	mitochondrion, nucleus	59.09	57.35
Zm00001d010998_P001	Maize	nucleus	47.73	57.27
Os05t0118700-00	Rice	nucleus	56.44	52.1
PGSC0003DMT400016896	Potato	mitochondrion	21.21	50.91
GSMUA_Achr5P29220_001	Banana	nucleus	32.2	42.5
TraesCS5B01G156400.1	Wheat	nucleus	35.98	39.42
KRG99904	Soybean	nucleus	29.92	37.62
KRH49082	Soybean	nucleus	29.17	36.67
Solyc11g072790.1.1	Tomato	nucleus	28.41	35.89
Solyc11g072770.1.1	Tomato	mitochondrion, nucleus	26.52	35.53
CDX77191	Canola	nucleus	31.44	35.17
Bra035688.1-P	Field mustard	nucleus	31.06	35.04
CDY31716	Canola	nucleus	31.06	35.04
PGSC0003DMT400065247	Potato	mitochondrion	26.52	35.0
CDX95764	Canola	nucleus	28.79	34.23
Bra000484.1-P	Field mustard	nucleus	28.79	33.63
CDX83299	Canola	nucleus	28.79	33.63
AT2G28610.1	Thale cress	nucleus	31.06	33.61
TraesCS3B01G399800.1	Wheat	nucleus	19.32	24.4
TraesCS2B01G542600.1	Wheat	plastid	20.45	22.78
TraesCS5B01G091000.1	Wheat	nucleus	21.97	18.07
TraesCS3B01G391100.1	Wheat	nucleus	20.45	18.06
TraesCS3B01G391200.1	Wheat	nucleus	18.94	17.24
TraesCS3B01G373800.1	Wheat	nucleus	14.02	14.18
TraesCS3B01G087800.1	Wheat	nucleus	13.26	13.41
TraesCS2B01G117900.1	Wheat	nucleus	12.5	12.64
TraesCS4B01G174400.1	Wheat	nucleus	14.77	12.62
TraesCS3B01G272200.1	Wheat	nucleus, plastid	16.67	8.54
TraesCS1B01G427400.1	Wheat	nucleus, plastid	15.53	8.45

Protein Annotations

EnsemblPlants:TraesCS1B01G069000.1	EnsemblPlantsGene:TraesCS1B01G069000	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF115
PFAM:PF00046	PFscan:PS50071	SEG:seg	SMART:SM00389	SUPFAM:SSF46689	TIGR:cd00086
MapMan:15.5.3.6	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:53364786..53365711

Molecular Weight (calculated)

28631.8 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.348

Length

264 amino acids

Sequence
(BLAST)

001: MAATATATAA ATSVVTGTTR WCPTPEQLMI LEEMYRGGLR TPNASQIQQI TAHLVHYGRI EGKNVFYWFQ NHKARDRQKL RRRLCMSHHL LSCAHYYAAA
101: NAGQYHHQQQ LLGAGAVPPP LLQHQQQQQY YSASCAGGSY DQHLLPTTVP ASAYAAAAAG YAYPFAAVPA SRCADPSPPN TPLSFHHQGG GVVGSPEYSL
201: GRLGNFGVVD DTCRPSRCEQ QPQQLAVATE DQAAPVTATG LFCRPLKTLD LFPGAIKEEQ RDVA

Best Arabidopsis Sequence Match ( AT2G28610.1 )
(BLAST)

001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL

Arabidopsis Description

WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.