Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065247 | Potato | mitochondrion | 94.92 | 93.5 |
| VIT_06s0004g03780.t01 | Wine grape | nucleus | 29.44 | 43.94 |
| KRG99904 | Soybean | nucleus | 36.55 | 34.29 |
| KRH49082 | Soybean | nucleus | 36.55 | 34.29 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 34.01 | 33.5 |
| Solyc11g072790.1.1 | Tomato | nucleus | 34.52 | 32.54 |
| Zm00001d010998_P001 | Maize | nucleus | 35.03 | 31.36 |
| Solyc03g096300.2.1 | Tomato | nucleus | 24.87 | 31.01 |
| Bra035688.1-P | Field mustard | nucleus | 35.03 | 29.49 |
| CDY31716 | Canola | nucleus | 35.03 | 29.49 |
| CDX95764 | Canola | nucleus | 32.49 | 28.83 |
| CDX77191 | Canola | nucleus | 34.52 | 28.81 |
| Bra000484.1-P | Field mustard | nucleus | 32.99 | 28.76 |
| CDX83299 | Canola | nucleus | 32.99 | 28.76 |
| AT2G28610.1 | Thale cress | nucleus | 35.53 | 28.69 |
| Zm00001d035535_P001 | Maize | nucleus | 36.55 | 27.91 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 35.53 | 26.62 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 35.53 | 26.52 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 36.55 | 26.47 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 35.53 | 26.22 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 35.53 | 24.91 |
| Os05t0118700-00 | Rice | nucleus | 36.04 | 24.83 |
| Solyc06g076000.1.1 | Tomato | nucleus | 25.89 | 21.25 |
| Solyc02g083950.2.1 | Tomato | nucleus | 28.43 | 20.59 |
| Solyc04g078650.2.1 | Tomato | nucleus, plastid | 24.87 | 20.25 |
| Solyc03g118770.2.1 | Tomato | nucleus | 28.43 | 14.25 |
| Solyc02g077390.1.1 | Tomato | nucleus | 21.83 | 12.01 |
| Solyc02g082670.2.1 | Tomato | nucleus | 16.24 | 11.68 |
| Solyc06g072890.1.1 | Tomato | nucleus | 15.23 | 11.36 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | UniProt:K4DAY4 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF115 |
| SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc11g072770.1 | EnsemblPlants:Solyc11g072770.1.1 | UniParc:UPI0002769E45 | SEG:seg |
Description
No Description!
Coordinates
chr11:+:55974904..55976508
Molecular Weight (calculated)
22761.5 Da
IEP (calculated)
9.843
GRAVY (calculated)
-0.702
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPRWSPTP QQLMILQDLY RKGLRNPTSS QVQKITTHLS LYGKIQCKNV FYWFQNHKAR DRQKLRKELM MLHKIHKNTS DDDVPHQFHT TQNTNSNLEY
101: NFPPSTFHTL YPQSPSILVH QGEGKDTSSS STQMMNNMGN VDFPKHCVIE NGMMRTNVQG WILMMTDMGP ISIPSCSSNK PLETLELFPI KATGIKE
101: NFPPSTFHTL YPQSPSILVH QGEGKDTSSS STQMMNNMGN VDFPKHCVIE NGMMRTNVQG WILMMTDMGP ISIPSCSSNK PLETLELFPI KATGIKE
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Arabidopsis Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.