Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77191 | Canola | nucleus | 83.2 | 86.02 |
| CDX95764 | Canola | nucleus | 77.46 | 85.14 |
| Bra035688.1-P | Field mustard | nucleus | 81.56 | 85.04 |
| CDY31716 | Canola | nucleus | 81.56 | 85.04 |
| Bra000484.1-P | Field mustard | nucleus | 78.69 | 84.96 |
| CDX83299 | Canola | nucleus | 78.69 | 84.96 |
| VIT_06s0004g03780.t01 | Wine grape | nucleus | 31.56 | 58.33 |
| PGSC0003DMT400016896 | Potato | mitochondrion | 21.72 | 48.18 |
| KRG99904 | Soybean | nucleus | 35.66 | 41.43 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 33.61 | 41.0 |
| KRH49082 | Soybean | nucleus | 34.84 | 40.48 |
| Solyc11g072790.1.1 | Tomato | nucleus | 31.56 | 36.84 |
| PGSC0003DMT400065247 | Potato | mitochondrion | 29.51 | 36.0 |
| Zm00001d010998_P001 | Maize | nucleus | 32.38 | 35.91 |
| Solyc11g072770.1.1 | Tomato | mitochondrion, nucleus | 28.69 | 35.53 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 34.43 | 31.94 |
| Zm00001d035535_P001 | Maize | nucleus | 33.61 | 31.78 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 35.25 | 31.62 |
| AT5G05770.1 | Thale cress | nucleus | 15.57 | 31.15 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 34.02 | 31.09 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 33.61 | 31.06 |
| Os05t0118700-00 | Rice | nucleus | 33.2 | 28.32 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 32.38 | 28.11 |
| AT3G11260.1 | Thale cress | nucleus | 20.08 | 26.92 |
| AT5G59340.1 | Thale cress | nucleus | 25.0 | 23.46 |
| AT1G46480.1 | Thale cress | nucleus | 23.36 | 22.71 |
| AT2G01500.1 | Thale cress | nucleus | 23.36 | 21.03 |
| AT2G17950.1 | Thale cress | nucleus | 23.77 | 19.86 |
| AT1G20710.1 | Thale cress | nucleus | 13.52 | 16.75 |
| AT3G18010.1 | Thale cress | nucleus | 23.36 | 16.29 |
| AT1G20700.1 | Thale cress | nucleus | 12.7 | 14.69 |
| AT4G35550.1 | Thale cress | nucleus | 13.93 | 12.69 |
| AT5G45980.1 | Thale cress | nucleus | 15.16 | 11.38 |
| AT5G17810.2 | Thale cress | nucleus | 12.3 | 11.19 |
| AT2G33880.2 | Thale cress | nucleus | 15.98 | 10.05 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 12.3 | 9.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:817410 | UniProt:A0A178VSX9 | ProteinID:AAD24374.1 | EMBL:AB058920 |
| ProteinID:AEC08149.1 | ArrayExpress:AT2G28610 | EnsemblPlantsGene:AT2G28610 | RefSeq:AT2G28610 | TAIR:AT2G28610 | RefSeq:AT2G28610-TAIR-G |
| EnsemblPlants:AT2G28610.1 | TAIR:AT2G28610.1 | EMBL:AY251397 | ncoils:Coil | EMBL:DQ446575 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008283 | GO:GO:0009058 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009943 | GO:GO:0009947 | GO:GO:0009987 | GO:GO:0010865 |
| GO:GO:0030154 | GO:GO:0099402 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_180429.1 |
| ProteinID:OAP08956.1 | PFAM:PF00046 | PO:PO:0000015 | PO:PO:0000017 | PO:PO:0000021 | PO:PO:0000037 |
| PO:PO:0000054 | PO:PO:0000229 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0004704 |
| PO:PO:0004705 | PO:PO:0005021 | PO:PO:0006504 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020128 |
| PO:PO:0025022 | Symbol:PRS | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF115 | UniProt:Q1PEZ2 |
| UniProt:Q9SIB4 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00000A56D1 | SEG:seg | : |
Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
Coordinates
chr2:+:12262013..12263595
Molecular Weight (calculated)
28135.9 Da
IEP (calculated)
9.528
GRAVY (calculated)
-0.746
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.