Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000484.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX95764 | Canola | nucleus | 92.04 | 93.69 |
| CDX77191 | Canola | nucleus | 86.73 | 83.05 |
| CDY31716 | Canola | nucleus | 85.84 | 82.91 |
| AT2G28610.1 | Thale cress | nucleus | 84.96 | 78.69 |
| VIT_06s0004g03780.t01 | Wine grape | nucleus | 32.74 | 56.06 |
| PGSC0003DMT400016896 | Potato | mitochondrion | 21.24 | 43.64 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 34.96 | 39.5 |
| KRH49082 | Soybean | nucleus | 35.84 | 38.57 |
| KRG99904 | Soybean | nucleus | 35.84 | 38.57 |
| Zm00001d010998_P001 | Maize | nucleus | 35.4 | 36.36 |
| Solyc11g072790.1.1 | Tomato | nucleus | 32.3 | 34.93 |
| CDY02582 | Canola | nucleus | 18.58 | 34.71 |
| PGSC0003DMT400065247 | Potato | mitochondrion | 29.65 | 33.5 |
| Solyc11g072770.1.1 | Tomato | mitochondrion, nucleus | 28.76 | 32.99 |
| Zm00001d035535_P001 | Maize | nucleus | 35.4 | 31.01 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 36.73 | 30.51 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 34.07 | 29.28 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 34.51 | 29.21 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 33.63 | 28.79 |
| Os05t0118700-00 | Rice | nucleus | 34.51 | 27.27 |
| CDY70975 | Canola | nucleus | 19.91 | 27.11 |
| CDY71075 | Canola | nucleus | 14.16 | 26.45 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 32.74 | 26.33 |
| CDY01007 | Canola | nucleus | 21.24 | 25.13 |
| CDY08539 | Canola | nucleus | 20.8 | 24.61 |
| CDX98862 | Canola | nucleus | 19.91 | 23.44 |
| CDX70130 | Canola | nucleus | 19.91 | 23.44 |
| CDY14103 | Canola | nucleus | 19.47 | 23.04 |
| CDY04966 | Canola | nucleus | 19.03 | 22.51 |
| CDY40847 | Canola | nucleus | 24.78 | 21.96 |
| CDY43848 | Canola | nucleus | 24.34 | 21.91 |
| CDY17046 | Canola | nucleus | 24.78 | 21.88 |
| CDY32648 | Canola | nucleus | 16.81 | 21.71 |
| CDY25659 | Canola | nucleus | 23.89 | 21.51 |
| CDX80277 | Canola | nucleus | 19.03 | 20.48 |
| CDY33030 | Canola | nucleus | 19.03 | 20.48 |
| CDY02885 | Canola | nucleus | 17.26 | 19.6 |
| CDY41086 | Canola | nucleus | 22.57 | 19.1 |
| CDX81686 | Canola | nucleus | 23.89 | 18.62 |
| CDY33728 | Canola | nucleus | 22.12 | 18.18 |
| CDY01358 | Canola | nucleus | 10.62 | 18.05 |
| CDY38144 | Canola | nucleus | 23.01 | 17.22 |
| CDY55370 | Canola | nucleus | 23.01 | 17.22 |
| CDY29212 | Canola | nucleus | 22.12 | 17.01 |
| CDY47803 | Canola | nucleus | 22.57 | 16.89 |
| CDY30337 | Canola | nucleus | 23.45 | 16.77 |
| CDX92182 | Canola | nucleus | 24.78 | 15.95 |
| CDY66658 | Canola | nucleus | 24.78 | 15.95 |
| CDY31870 | Canola | nucleus | 13.72 | 15.9 |
| CDX93197 | Canola | nucleus | 13.72 | 15.9 |
| CDY41648 | Canola | nucleus | 11.95 | 15.79 |
| CDX75955 | Canola | nucleus | 24.34 | 15.71 |
| CDY51928 | Canola | nucleus | 24.34 | 15.58 |
| CDY29511 | Canola | nucleus | 13.72 | 15.27 |
| CDY65899 | Canola | nucleus | 13.27 | 14.35 |
| CDY72488 | Canola | nucleus, plastid | 13.72 | 12.55 |
| CDX72546 | Canola | nucleus | 14.16 | 12.26 |
| CDY40623 | Canola | nucleus | 14.16 | 12.17 |
| CDX75511 | Canola | nucleus | 13.72 | 12.11 |
| CDY48780 | Canola | nucleus | 16.81 | 11.88 |
| CDX87744 | Canola | nucleus | 16.81 | 11.88 |
| CDX69148 | Canola | nucleus | 13.72 | 11.7 |
| CDY38461 | Canola | nucleus | 13.27 | 10.95 |
| CDY24814 | Canola | nucleus | 11.5 | 10.88 |
| CDY16883 | Canola | nucleus | 13.27 | 10.87 |
| CDY66087 | Canola | nucleus | 12.83 | 10.36 |
| CDY02686 | Canola | nucleus | 12.83 | 10.25 |
| CDY29949 | Canola | nucleus | 12.83 | 10.03 |
| CDY21173 | Canola | nucleus | 12.83 | 10.03 |
| CDY69228 | Canola | nucleus | 15.04 | 8.72 |
| CDY17211 | Canola | nucleus | 15.04 | 8.72 |
| CDY51756 | Canola | plastid | 12.39 | 8.59 |
| CDY50656 | Canola | nucleus | 12.39 | 8.26 |
| CDX79549 | Canola | nucleus | 14.16 | 8.06 |
| CDY29211 | Canola | mitochondrion | 3.1 | 4.7 |
Protein Annotations
| EnsemblPlants:CDX83299 | EnsemblPlantsGene:GSBRNA2T00138854001 | Gene3D:1.10.10.60 | GO:A0A078D4Q8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF115 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDX83299 | ProteinID:CDX83299.1 | SEG:seg |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000253FFAA | MapMan:15.5.3.6 | : | : |
Description
BnaA03g22070D
Coordinates
chrLK031832:+:919445..920484
Molecular Weight (calculated)
26088.5 Da
IEP (calculated)
9.590
GRAVY (calculated)
-0.604
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVASTRWC PTTEQLMILE EMYRTGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ LQQIKLKPIS MVSEPLNNII
101: DHHNLYYHNH HRPYDHSSFA CCSQPSSVCL SHQGIGVEAQ SKVVNEYYYN KSGPEDMLMQ KPITGQNSSY GRDWMVMMDM GPRPSYSSLS PIPCINMMMN
201: SPKIPPKTLE LFPISSINSK QDSSKL
101: DHHNLYYHNH HRPYDHSSFA CCSQPSSVCL SHQGIGVEAQ SKVVNEYYYN KSGPEDMLMQ KPITGQNSSY GRDWMVMMDM GPRPSYSSLS PIPCINMMMN
201: SPKIPPKTLE LFPISSINSK QDSSKL
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Arabidopsis Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.