Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g03780.t01 | Wine grape | nucleus | 47.27 | 39.39 |
| PGSC0003DMT400065247 | Potato | mitochondrion | 61.82 | 34.0 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 46.36 | 25.5 |
| PGSC0003DMT400053435 | Potato | nucleus | 34.55 | 24.2 |
| KRG99904 | Soybean | nucleus | 41.82 | 21.9 |
| Zm00001d010998_P001 | Maize | nucleus | 43.64 | 21.82 |
| AT2G28610.1 | Thale cress | nucleus | 48.18 | 21.72 |
| Zm00001d035535_P001 | Maize | nucleus | 50.91 | 21.71 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 50.91 | 21.29 |
| Bra000484.1-P | Field mustard | nucleus | 43.64 | 21.24 |
| CDX83299 | Canola | nucleus | 43.64 | 21.24 |
| TraesCS1B01G069000.1 | Wheat | nucleus, plastid | 50.91 | 21.21 |
| CDX95764 | Canola | nucleus | 42.73 | 21.17 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 50.91 | 20.97 |
| KRH49082 | Soybean | nucleus | 40.0 | 20.95 |
| CDY31716 | Canola | nucleus | 44.55 | 20.94 |
| Bra035688.1-P | Field mustard | nucleus | 44.55 | 20.94 |
| CDX77191 | Canola | nucleus | 44.55 | 20.76 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 49.09 | 19.85 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 48.18 | 18.86 |
| Os05t0118700-00 | Rice | nucleus | 48.18 | 18.53 |
| PGSC0003DMT400020662 | Potato | nucleus | 37.27 | 17.01 |
| PGSC0003DMT400077947 | Potato | nucleus | 35.45 | 16.53 |
| PGSC0003DMT400009157 | Potato | nucleus | 36.36 | 13.94 |
| PGSC0003DMT400003980 | Potato | nucleus | 28.18 | 11.27 |
| PGSC0003DMT400069529 | Potato | nucleus | 24.55 | 11.02 |
| PGSC0003DMT400014464 | Potato | nucleus | 36.36 | 10.23 |
| PGSC0003DMT400027850 | Potato | nucleus | 29.09 | 9.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | UniProt:M1A8A9 | PFAM:PF00046 | EnsemblPlantsGene:PGSC0003DMG400006609 | PGSC:PGSC0003DMG400006609 | EnsemblPlants:PGSC0003DMT400016896 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF115 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00029536A3 |
| SEG:seg | : | : | : | : | : |
Description
Narrow sheath protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006609]
Coordinates
chr6:+:56166080..56166412
Molecular Weight (calculated)
12868.6 Da
IEP (calculated)
10.722
GRAVY (calculated)
-0.872
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MARARWKPTP QQLMILQDMY KKGLTNPNSC QVQMITSHLS MYGKIQWKNV FYWFQNHKAR DRQKVRKQQK QNPIPPPPPS PPSSSSYASG PVNCQLYPNS
101: PTIFLHQVHY
101: PTIFLHQVHY
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Arabidopsis Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.