Factsheet for PGSC0003DMT400009157

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g083950.2.1	Tomato	nucleus	89.9	94.85
GSMUA_Achr7P07430_001	Banana	nucleus	28.92	58.04
VIT_04s0023g03310.t01	Wine grape	nucleus	51.92	53.21
KRH28790	Soybean	nucleus	52.96	52.6
KRH76665	Soybean	nucleus	53.66	52.03
PGSC0003DMT400016896	Potato	mitochondrion	13.94	36.36
Bra037245.1-P	Field mustard	nucleus	39.02	36.01
Bra024485.1-P	Field mustard	nucleus	36.59	35.71
Bra039894.1-P	Field mustard	nucleus	37.28	35.43
AT2G17950.1	Thale cress	nucleus	35.54	34.93
PGSC0003DMT400053435	Potato	nucleus	18.82	34.39
PGSC0003DMT400065247	Potato	mitochondrion	19.16	27.5
CDY29211	Canola	mitochondrion	12.89	24.83
PGSC0003DMT400077947	Potato	nucleus	19.86	24.15
PGSC0003DMT400020662	Potato	nucleus	19.51	23.24
PGSC0003DMT400014464	Potato	nucleus	26.48	19.44
PGSC0003DMT400069529	Potato	nucleus	13.94	16.33
PGSC0003DMT400027850	Potato	nucleus	16.03	13.81
PGSC0003DMT400003980	Potato	nucleus	12.2	12.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	UniProt:M0ZVP9	PFAM:PF00046	EnsemblPlantsGene:PGSC0003DMG400003561	PGSC:PGSC0003DMG400003561	EnsemblPlants:PGSC0003DMT400009157
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF123	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002949041
SEG:seg	:	:	:	:	:

Description

Protein WUSCHEL [Source:PGSC_GENE;Acc:PGSC0003DMG400003561]

Coordinates

chr2:-:39449855..39451242

Molecular Weight (calculated)

32558.4 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.969

Length

287 amino acids

Sequence
(BLAST)

001: MEHQQNYQHN IEDGGVSSKN NNSFMCRQSS SRWTPTSDQI RILKDLYYNN GVRSPTAEQI QRISAKLRQY GKIEGKNVFY WFQNHKARER QKKRLIAAAS
101: ATDNNNNNNI SPMQMIPHLW RSPDDHHKYN NTSTNPGVQC PSASSQGVLA VGQTGNYGYG TLAMEKSFRE CSISPPGGSS MNHQNFTWVG VDPYNNIMST
201: TSPATYPFLE KSNNKHYEET LDEEQEEENY QRGNSALETL SLFPMHEENM FSNFCIKHHE SSGGGGGWYH SDNNNLAALE LTLNSFP

Best Arabidopsis Sequence Match ( AT2G17950.1 )
(BLAST)

001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN

Arabidopsis Description

WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.