Factsheet for Solyc02g083950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009157	Potato	nucleus	94.85	89.9
GSMUA_Achr7P07430_001	Banana	nucleus	29.78	56.64
VIT_04s0023g03310.t01	Wine grape	nucleus	52.94	51.43
KRH28790	Soybean	nucleus	53.31	50.17
KRH76665	Soybean	nucleus	54.04	49.66
Bra024485.1-P	Field mustard	nucleus	38.24	35.37
Bra037245.1-P	Field mustard	nucleus	40.44	35.37
Bra039894.1-P	Field mustard	nucleus	38.97	35.1
AT2G17950.1	Thale cress	nucleus	37.13	34.59
Solyc03g096300.2.1	Tomato	nucleus	19.85	34.18
Solyc11g072770.1.1	Tomato	mitochondrion, nucleus	20.59	28.43
CDY29211	Canola	mitochondrion	13.97	25.5
Solyc11g072790.1.1	Tomato	nucleus	19.49	25.36
Solyc04g078650.2.1	Tomato	nucleus, plastid	20.59	23.14
Solyc06g076000.1.1	Tomato	nucleus	20.22	22.92
Solyc03g118770.2.1	Tomato	nucleus	28.31	19.59
Solyc06g072890.1.1	Tomato	nucleus	15.07	15.53
Solyc02g077390.1.1	Tomato	nucleus	17.28	13.13
Solyc02g082670.2.1	Tomato	nucleus	12.87	12.77

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	ProteinID:ADZ13564.1	UniProt:F6LIE3	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0030154
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF123	SMART:SM00389	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc02g083950.2	EnsemblPlants:Solyc02g083950.2.1	UniParc:UPI000211A0FF
SEG:seg	:	:	:	:	:

Description

Wuschel [Source:UniProtKB/TrEMBL;Acc:F6LIE3]

Coordinates

chr2:-:47190269..47191694

Molecular Weight (calculated)

31032.8 Da

IEP (calculated)

6.842

GRAVY (calculated)

-0.928

Length

272 amino acids

Sequence
(BLAST)

001: MEHQHNIEDG GKNSNNSFLC RQSSSRWTPT SDQIRILKDL YYNNGVRSPT AEQIQRISAK LRQYGKIEGK NVFYWFQNHK ARERQKKRLI AAASATDNNN
101: ISSMQMIPHL WRSPDDHHKY NTTTTNPGVQ CPSPSSHGVL PVVQTGNYGY GTLAMEKSFR ECSISPPGGS YHQNLTWVGV DPYNNMSTTS PATYPFLEKS
201: NNKHYEETLD EEQEEENYQR GNSALETLSL FPMHEENIIS NFCIKHHESS GGWYHSDNNN LAALELTLNS FP

Best Arabidopsis Sequence Match ( AT2G17950.1 )
(BLAST)

001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN

Arabidopsis Description

WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.