Factsheet for Bra037245.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30337	Canola	nucleus	100.0	98.42
Bra039894.1-P	Field mustard	nucleus	81.35	83.77
Bra024485.1-P	Field mustard	nucleus	78.46	82.99
AT2G17950.1	Thale cress	nucleus	75.24	80.14
GSMUA_Achr7P07430_001	Banana	nucleus	23.15	50.35
VIT_04s0023g03310.t01	Wine grape	nucleus	40.19	44.64
KRH28790	Soybean	nucleus	40.51	43.6
KRH76665	Soybean	nucleus	39.87	41.89
Solyc02g083950.2.1	Tomato	nucleus	35.37	40.44
PGSC0003DMT400009157	Potato	nucleus	36.01	39.02
Bra028749.1-P	Field mustard	nucleus	17.36	31.03
Bra009132.1-P	Field mustard	nucleus	18.01	29.17
Bra034855.1-P	Field mustard	mitochondrion	11.9	25.87
Bra035688.1-P	Field mustard	nucleus	17.68	23.5
Bra000484.1-P	Field mustard	nucleus	17.04	23.45
Bra014055.1-P	Field mustard	nucleus	18.01	21.79
Bra032212.1-P	Field mustard	nucleus	17.36	21.51
Bra026791.1-P	Field mustard	nucleus	17.36	20.85
Bra012245.1-P	Field mustard	nucleus	8.36	19.55
Bra017448.1-P	Field mustard	nucleus	17.04	19.2
Bra022267.1-P	Field mustard	nucleus	19.61	17.38
Bra001694.1-P	Field mustard	nucleus	19.61	17.28
Bra002576.1-P	Field mustard	nucleus	11.58	17.14
Bra025839.1-P	Field mustard	nucleus	10.93	16.75
Bra036446.1-P	Field mustard	nucleus	14.15	16.6
Bra020321.1-P	Field mustard	nucleus	10.29	16.08
Bra022008.1-P	Field mustard	nucleus	15.43	15.58
Bra023638.1-P	Field mustard	nucleus	13.18	14.91
Bra002108.1-P	Field mustard	nucleus	12.86	14.65
Bra011623.1-P	Field mustard	nucleus	11.58	13.95
Bra031980.1-P	Field mustard	nucleus	14.15	13.66
Bra005464.1-P	Field mustard	nucleus	16.72	13.33
Bra017720.1-P	Field mustard	nucleus	11.25	13.21
Bra022960.1-P	Field mustard	nucleus	16.4	12.98
Bra010531.1-P	Field mustard	nucleus	9.32	12.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra037245	EnsemblPlants:Bra037245.1	EnsemblPlants:Bra037245.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4F834	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF510	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002541E68
SEG:seg	:	:	:	:	:

Description

AT2G17950 (E=2e-100) WUS, PGA6, WUS1 | WUS (WUSCHEL); DNA binding / protein binding / transcription factor/ transcription regulator

Coordinates

chrA09:-:4798363..4800077

Molecular Weight (calculated)

35258.3 Da

IEP (calculated)

7.359

GRAVY (calculated)

-1.084

Length

311 amino acids

Sequence
(BLAST)

001: MEQPQHHHHH HQQTDQESGN NNKSGSGGYP CRQTSTRWTP TTEQIRILKD LYYNNGVRSP TADQIQKISA RLRQYGKIEG KNVFYWFQNH KARERQKKRF
101: NGTTMTTPTT SSPNSVMMAN DHYHHNHHPL LQHHHHGVTM HRPASVNIKL DQENHLLHQN ISYPNFQNGN LNHASSGAEY GALNASSNGY MSSHLYGSME
201: QDYSVSYNNV SGGWTNMDHN HHYSAPAYNF FDRPKPLSGL EDHEEEEYGG DAYLEHSRTL SLFPMHGEDN INGGGGAFLK YGQSDGRDYY GRGSCASLKL
301: CLNSYAGVSP D

Best Arabidopsis Sequence Match ( AT2G17950.1 )
(BLAST)

001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN

Arabidopsis Description

WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.