Factsheet for Bra028749.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14103	Canola	nucleus	97.13	88.48
CDY04966	Canola	nucleus	96.55	87.96
Bra009132.1-P	Field mustard	nucleus	88.51	80.21
AT5G05770.1	Thale cress	nucleus	49.43	70.49
Bra034855.1-P	Field mustard	mitochondrion	54.6	66.43
Solyc03g096300.2.1	Tomato	nucleus	54.02	59.49
PGSC0003DMT400053435	Potato	nucleus	53.45	59.24
KRH73152	Soybean	nucleus	54.6	53.67
KRG97769	Soybean	nucleus	51.72	51.72
KRH31116	Soybean	nucleus	52.3	50.56
VIT_13s0019g03460.t01	Wine grape	nucleus	39.08	48.23
Os01t0854500-01	Rice	nucleus	48.85	42.5
GSMUA_Achr7P14860_001	Banana	nucleus	45.98	42.11
OQU87881	Sorghum	nucleus	50.0	39.91
TraesCS3B01G399800.1	Wheat	nucleus	47.13	39.23
HORVU3Hr1G085050.3	Barley	nucleus	47.13	39.05
TraesCS3D01G361100.1	Wheat	nucleus	47.13	39.05
Zm00001d042821_P001	Maize	nucleus	49.43	38.91
TraesCS3A01G368100.1	Wheat	nucleus	47.13	38.68
Zm00001d012330_P001	Maize	nucleus	48.28	35.74
Bra032212.1-P	Field mustard	nucleus	29.31	20.32
Bra000484.1-P	Field mustard	nucleus	25.86	19.91
Bra014055.1-P	Field mustard	nucleus	28.74	19.46
Bra035688.1-P	Field mustard	nucleus	25.86	19.23
Bra002576.1-P	Field mustard	nucleus	22.41	18.57
Bra026791.1-P	Field mustard	nucleus	27.59	18.53
Bra024485.1-P	Field mustard	nucleus	31.03	18.37
Bra039894.1-P	Field mustard	nucleus	31.61	18.21
Bra017448.1-P	Field mustard	nucleus	28.74	18.12
Bra012245.1-P	Field mustard	nucleus	13.79	18.05
Bra037245.1-P	Field mustard	nucleus	31.03	17.36
Bra020321.1-P	Field mustard	nucleus	18.97	16.58
Bra001694.1-P	Field mustard	nucleus	32.18	15.86
Bra022267.1-P	Field mustard	nucleus	31.61	15.67
Bra025839.1-P	Field mustard	nucleus	16.09	13.79
Bra010531.1-P	Field mustard	nucleus	16.09	11.86
Bra017720.1-P	Field mustard	nucleus	17.82	11.7
Bra011623.1-P	Field mustard	nucleus	17.24	11.63
Bra022008.1-P	Field mustard	nucleus	20.11	11.36
Bra036446.1-P	Field mustard	nucleus	15.52	10.19
Bra023638.1-P	Field mustard	nucleus	16.09	10.18
Bra002108.1-P	Field mustard	nucleus	15.52	9.89
Bra005464.1-P	Field mustard	nucleus	20.69	9.23
Bra031980.1-P	Field mustard	nucleus	16.67	9.01
Bra022960.1-P	Field mustard	nucleus	20.11	8.91

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra028749	EnsemblPlants:Bra028749.1	EnsemblPlants:Bra028749.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4EIY4	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF149	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002543125
SEG:seg	:	:	:	:	:

Description

AT3G11260 (E=2e-053) WOX5 | WOX5 (WUSCHEL RELATED HOMEOBOX 5); transcription factor

Coordinates

chrA02:+:2245138..2245752

Molecular Weight (calculated)

20052.5 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.844

Length

174 amino acids

Sequence
(BLAST)

001: MGGGGTGTKC GRWNPTVEQV KLLTDLFKAG LRTPNTDQIQ KISTELSAYG KIESKNVFYW FQNHKARERQ KRRKISTVDY DHRQDTNLSL SYRHNPCHHQ
101: TPPKDTFEGR EEEENVIETL QLFPLSKVER ANITAASYNE YIREHVNTTV FSTYSSSCGA EMEHPPLDLR LSFL

Best Arabidopsis Sequence Match ( AT3G11260.1 )
(BLAST)

001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL

Arabidopsis Description

WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.