Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0854500-01 | Rice | nucleus | 71.91 | 84.5 |
| Zm00001d042821_P001 | Maize | nucleus | 77.45 | 82.35 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 67.66 | 76.08 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 67.23 | 75.24 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 67.23 | 74.53 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 65.96 | 73.81 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 43.4 | 53.68 |
| PGSC0003DMT400053435 | Potato | nucleus | 34.47 | 51.59 |
| Solyc03g096300.2.1 | Tomato | nucleus | 34.04 | 50.63 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 30.21 | 50.35 |
| AT5G05770.1 | Thale cress | nucleus | 25.96 | 50.0 |
| KRH73152 | Soybean | nucleus | 37.45 | 49.72 |
| KRG97769 | Soybean | nucleus | 36.6 | 49.43 |
| KRH31116 | Soybean | nucleus | 37.45 | 48.89 |
| Bra028749.1-P | Field mustard | nucleus | 35.74 | 48.28 |
| AT3G11260.1 | Thale cress | nucleus | 36.6 | 47.25 |
| CDY08539 | Canola | nucleus | 36.6 | 45.03 |
| Bra034855.1-P | Field mustard | mitochondrion | 27.23 | 44.76 |
| CDY04966 | Canola | nucleus | 36.17 | 44.5 |
| CDY01007 | Canola | nucleus | 36.17 | 44.5 |
| CDY14103 | Canola | nucleus | 35.74 | 43.98 |
| CDX98862 | Canola | nucleus | 35.32 | 43.23 |
| CDX70130 | Canola | nucleus | 34.47 | 42.19 |
| Bra009132.1-P | Field mustard | nucleus | 34.47 | 42.19 |
| Zm00001d037309_P001 | Maize | nucleus | 15.74 | 29.37 |
| Zm00001d010998_P001 | Maize | nucleus | 22.55 | 24.09 |
| Zm00001d004889_P001 | Maize | nucleus | 24.68 | 22.14 |
| Zm00001d052598_P001 | Maize | nucleus | 24.68 | 21.89 |
| Zm00001d035535_P001 | Maize | nucleus | 23.4 | 21.32 |
| Zm00001d026453_P001 | Maize | plastid | 21.7 | 20.4 |
| Zm00001d026537_P001 | Maize | plastid | 24.68 | 17.85 |
| Zm00001d001948_P001 | Maize | nucleus, plastid | 23.4 | 17.19 |
| Zm00001d042920_P001 | Maize | nucleus | 21.7 | 15.74 |
| Zm00001d012419_P001 | Maize | nucleus | 21.7 | 14.87 |
| Zm00001d022524_P001 | Maize | nucleus | 15.74 | 14.29 |
| Zm00001d012516_P001 | Maize | nucleus | 14.89 | 12.41 |
| Zm00001d043076_P001 | Maize | nucleus | 14.04 | 12.09 |
| Zm00001d028986_P001 | Maize | nucleus | 16.6 | 12.07 |
| Zm00001d024410_P001 | Maize | nucleus | 14.47 | 11.56 |
| Zm00001d047559_P001 | Maize | nucleus | 15.32 | 11.43 |
| Zm00001d039017_P001 | Maize | nucleus | 17.02 | 8.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:732764 | ProteinID:AQK99350.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:K7VNC3 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF149 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002209E8B | EnsemblPlantsGene:Zm00001d012330 |
| EnsemblPlants:Zm00001d012330_P001 | EnsemblPlants:Zm00001d012330_T001 | SEG:seg | : | : | : |
Description
WUSCHEL-homeobox-transcription factor 5APutative homeobox DNA-binding domain superfamily protein
Coordinates
chr8:+:172530595..172531302
Molecular Weight (calculated)
26473.1 Da
IEP (calculated)
10.242
GRAVY (calculated)
-0.859
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTEAPSGRV GVKCGRWNPT PEQVKVLTEL FRAGLRTPST DQIQRISAHL GAFGKVESKN VFYWFQNHKA RERHHHKKKK RRRRGAAMAS SSSPDSGSGS
101: GSSEEDGRVA AAADADLVLQ PSPGRSKSKR EARRSYGGGH HRRLVTCKQL AHTHRYVRDV VEQQEEDTWE RPTREAVETL ELFPLKSYVD LEAEKVRRYV
201: VRAGASEQCR DFSFFDVSGG RDPPLLELRL CSFGP
101: GSSEEDGRVA AAADADLVLQ PSPGRSKSKR EARRSYGGGH HRRLVTCKQL AHTHRYVRDV VEQQEEDTWE RPTREAVETL ELFPLKSYVD LEAEKVRRYV
201: VRAGASEQCR DFSFFDVSGG RDPPLLELRL CSFGP
001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
Arabidopsis Description
WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.