Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028749.1-P | Field mustard | nucleus | 88.48 | 97.13 |
| CDY04966 | Canola | nucleus | 96.34 | 96.34 |
| CDX98862 | Canola | nucleus | 87.96 | 87.5 |
| CDX70130 | Canola | nucleus | 87.43 | 86.98 |
| AT5G05770.1 | Thale cress | nucleus | 52.88 | 82.79 |
| CDY01007 | Canola | nucleus | 69.63 | 69.63 |
| CDY08539 | Canola | nucleus | 69.11 | 69.11 |
| Solyc03g096300.2.1 | Tomato | nucleus | 49.21 | 59.49 |
| PGSC0003DMT400053435 | Potato | nucleus | 48.69 | 59.24 |
| KRH73152 | Soybean | nucleus | 51.83 | 55.93 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 40.84 | 55.32 |
| KRG97769 | Soybean | nucleus | 49.21 | 54.02 |
| KRH31116 | Soybean | nucleus | 49.74 | 52.78 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 43.98 | 44.21 |
| Os01t0854500-01 | Rice | nucleus | 44.5 | 42.5 |
| OQU87881 | Sorghum | nucleus | 45.55 | 39.91 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 42.93 | 39.23 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 42.93 | 39.05 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 42.93 | 39.05 |
| Zm00001d042821_P001 | Maize | nucleus | 45.03 | 38.91 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 42.93 | 38.68 |
| Zm00001d012330_P001 | Maize | nucleus | 43.98 | 35.74 |
| CDY02582 | Canola | nucleus | 19.37 | 30.58 |
| CDY70975 | Canola | nucleus | 22.51 | 25.9 |
| CDY71075 | Canola | nucleus | 15.18 | 23.97 |
| CDY43848 | Canola | nucleus | 27.75 | 21.12 |
| CDY40847 | Canola | nucleus | 27.23 | 20.39 |
| CDY25659 | Canola | nucleus | 26.7 | 20.32 |
| CDY01358 | Canola | nucleus | 14.14 | 20.3 |
| CDY17046 | Canola | nucleus | 26.7 | 19.92 |
| CDX95764 | Canola | nucleus | 23.04 | 19.82 |
| CDX83299 | Canola | nucleus | 23.04 | 19.47 |
| CDX77191 | Canola | nucleus | 23.56 | 19.07 |
| CDY31716 | Canola | nucleus | 23.04 | 18.8 |
| CDX80277 | Canola | nucleus | 20.42 | 18.57 |
| CDY29212 | Canola | nucleus | 28.27 | 18.37 |
| CDY32648 | Canola | nucleus | 16.75 | 18.29 |
| CDY55370 | Canola | nucleus | 28.8 | 18.21 |
| CDY38144 | Canola | nucleus | 28.8 | 18.21 |
| CDY33030 | Canola | nucleus | 19.9 | 18.1 |
| CDY41086 | Canola | nucleus | 25.13 | 17.98 |
| CDY47803 | Canola | nucleus | 28.27 | 17.88 |
| CDY33728 | Canola | nucleus | 24.61 | 17.09 |
| CDY30337 | Canola | nucleus | 28.27 | 17.09 |
| CDY02885 | Canola | nucleus | 17.28 | 16.58 |
| CDX75955 | Canola | nucleus | 30.37 | 16.57 |
| CDY51928 | Canola | nucleus | 30.37 | 16.43 |
| CDX92182 | Canola | nucleus | 29.84 | 16.24 |
| CDX81686 | Canola | nucleus | 24.61 | 16.21 |
| CDY66658 | Canola | nucleus | 29.32 | 15.95 |
| CDY31870 | Canola | nucleus | 16.23 | 15.9 |
| CDX93197 | Canola | nucleus | 16.23 | 15.9 |
| CDY41648 | Canola | nucleus | 13.61 | 15.2 |
| CDY65899 | Canola | nucleus | 15.18 | 13.88 |
| CDY29511 | Canola | nucleus | 14.66 | 13.79 |
| CDY40623 | Canola | nucleus | 17.28 | 12.55 |
| CDX72546 | Canola | nucleus | 16.75 | 12.26 |
| CDY24814 | Canola | nucleus | 15.18 | 12.13 |
| CDX75511 | Canola | nucleus | 16.23 | 12.11 |
| CDX69148 | Canola | nucleus | 16.75 | 12.08 |
| CDX87744 | Canola | nucleus | 18.85 | 11.25 |
| CDY48780 | Canola | nucleus | 18.85 | 11.25 |
| CDY72488 | Canola | nucleus, plastid | 13.61 | 10.53 |
| CDY66087 | Canola | nucleus | 15.18 | 10.36 |
| CDY02686 | Canola | nucleus | 15.18 | 10.25 |
| CDY16883 | Canola | nucleus | 14.66 | 10.14 |
| CDY29211 | Canola | mitochondrion | 7.85 | 10.07 |
| CDY38461 | Canola | nucleus | 14.14 | 9.85 |
| CDY29949 | Canola | nucleus | 14.14 | 9.34 |
| CDY21173 | Canola | nucleus | 14.14 | 9.34 |
| CDY69228 | Canola | nucleus | 18.85 | 9.23 |
| CDY17211 | Canola | nucleus | 18.85 | 9.23 |
| CDY51756 | Canola | plastid | 15.18 | 8.9 |
| CDX79549 | Canola | nucleus | 18.32 | 8.82 |
| CDY50656 | Canola | nucleus | 14.66 | 8.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078FP51 | UniProt:A0A078FP51 | EnsemblPlants:CDY14103 | ProteinID:CDY14103 |
| ProteinID:CDY14103.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00078643001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF149 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EBBF94 | SEG:seg | : | : | : |
Description
BnaC02g02200DBnaC02g02200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP51]
Coordinates
chrLK032040:-:436271..436946
Molecular Weight (calculated)
21746.5 Da
IEP (calculated)
8.807
GRAVY (calculated)
-0.808
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSEGFSIKA RGLGNNNNMG GGGTGTKCGR WNPTVEQVKL LTDLFKAGLR TPSTDQIQKI STELSVYGKI ESKNVFYWFQ NHKARERQKR RKISTVDYDH
101: RQDTNLSLSH RHNPCHHQTP PKDTFGGREE EENVIETLQL FPLSKVERAN ITAASYNEYI REHVNTTVFS TYSSCGAEME HPPLDLRLSF L
101: RQDTNLSLSH RHNPCHHQTP PKDTFGGREE EENVIETLQL FPLSKVERAN ITAASYNEYI REHVNTTVFS TYSSCGAEME HPPLDLRLSF L
001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
Arabidopsis Description
WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.