Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40623 | Canola | nucleus | 92.72 | 92.02 |
| CDX75511 | Canola | nucleus | 85.82 | 87.5 |
| CDX69148 | Canola | nucleus | 86.97 | 85.66 |
| CDY41648 | Canola | nucleus | 54.79 | 83.63 |
| AT4G35550.1 | Thale cress | nucleus | 84.29 | 82.09 |
| CDY24814 | Canola | nucleus | 71.65 | 78.24 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 36.02 | 56.97 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 51.72 | 56.49 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 49.43 | 54.66 |
| PGSC0003DMT400003980 | Potato | nucleus | 54.79 | 52.0 |
| Solyc02g082670.2.1 | Tomato | nucleus | 54.41 | 51.82 |
| CDY01358 | Canola | nucleus | 26.05 | 51.13 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 45.21 | 49.79 |
| KRH01611 | Soybean | nucleus | 50.19 | 49.25 |
| KRH70496 | Soybean | nucleus | 49.43 | 49.24 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 40.23 | 44.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.51 | 43.66 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 36.78 | 43.64 |
| CDY29511 | Canola | nucleus | 33.33 | 42.86 |
| CDY65899 | Canola | nucleus | 34.1 | 42.58 |
| CDX93197 | Canola | nucleus | 31.42 | 42.05 |
| CDY31870 | Canola | nucleus | 31.42 | 42.05 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 44.06 | 40.64 |
| CDY71075 | Canola | nucleus | 9.2 | 19.83 |
| CDY01007 | Canola | nucleus | 13.41 | 18.32 |
| CDY08539 | Canola | nucleus | 13.03 | 17.8 |
| CDY70975 | Canola | nucleus | 11.11 | 17.47 |
| CDY14103 | Canola | nucleus | 12.26 | 16.75 |
| CDY04966 | Canola | nucleus | 12.26 | 16.75 |
| CDX98862 | Canola | nucleus | 12.26 | 16.67 |
| CDX70130 | Canola | nucleus | 12.26 | 16.67 |
| CDY02582 | Canola | nucleus | 7.66 | 16.53 |
| CDY40847 | Canola | nucleus | 15.33 | 15.69 |
| CDY17046 | Canola | nucleus | 15.33 | 15.62 |
| CDY43848 | Canola | nucleus | 14.94 | 15.54 |
| CDY25659 | Canola | nucleus | 14.18 | 14.74 |
| CDY31716 | Canola | nucleus | 13.03 | 14.53 |
| CDX95764 | Canola | nucleus | 12.26 | 14.41 |
| CDY38461 | Canola | nucleus | 14.94 | 14.23 |
| CDY21173 | Canola | nucleus | 15.71 | 14.19 |
| CDY29949 | Canola | nucleus | 15.71 | 14.19 |
| CDY72488 | Canola | nucleus, plastid | 13.41 | 14.17 |
| CDX83299 | Canola | nucleus | 12.26 | 14.16 |
| CDY16883 | Canola | nucleus | 14.94 | 14.13 |
| CDX77191 | Canola | nucleus | 12.64 | 13.98 |
| CDY02686 | Canola | nucleus | 14.94 | 13.78 |
| CDX87744 | Canola | nucleus | 16.86 | 13.75 |
| CDY48780 | Canola | nucleus | 16.86 | 13.75 |
| CDY66087 | Canola | nucleus | 14.56 | 13.57 |
| CDY41086 | Canola | nucleus | 13.03 | 12.73 |
| CDY29212 | Canola | nucleus | 14.18 | 12.59 |
| CDY47803 | Canola | nucleus | 14.56 | 12.58 |
| CDX80277 | Canola | nucleus | 9.96 | 12.38 |
| CDY33728 | Canola | nucleus | 13.03 | 12.36 |
| CDY69228 | Canola | nucleus | 18.39 | 12.31 |
| CDY38144 | Canola | nucleus | 14.18 | 12.25 |
| CDY55370 | Canola | nucleus | 14.18 | 12.25 |
| CDY17211 | Canola | nucleus | 18.01 | 12.05 |
| CDY32648 | Canola | nucleus | 8.05 | 12.0 |
| CDY51756 | Canola | plastid | 14.94 | 11.96 |
| CDY33030 | Canola | nucleus | 9.58 | 11.9 |
| CDY50656 | Canola | nucleus | 15.33 | 11.8 |
| CDY30337 | Canola | nucleus | 13.79 | 11.39 |
| CDX79549 | Canola | nucleus | 17.24 | 11.34 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 10.34 | 10.84 |
| CDX81686 | Canola | nucleus | 11.88 | 10.69 |
| CDY02885 | Canola | nucleus | 8.05 | 10.55 |
| CDX75955 | Canola | nucleus | 13.79 | 10.29 |
| CDY66658 | Canola | nucleus | 13.79 | 10.26 |
| CDX92182 | Canola | nucleus | 13.79 | 10.26 |
| CDY51928 | Canola | nucleus | 13.79 | 10.2 |
| CDY29211 | Canola | mitochondrion | 2.3 | 4.03 |
Protein Annotations
| EnsemblPlants:CDX72546 | EnsemblPlantsGene:GSBRNA2T00100083001 | Gene3D:1.10.10.60 | GO:A0A078C6A3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF340 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDX72546 | ProteinID:CDX72546.1 | SEG:seg |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EC4BAF | MapMan:15.5.3.6 | : | : |
Description
BnaC07g45680D
Coordinates
chrLK031796:-:1793637..1794929
Molecular Weight (calculated)
29078.0 Da
IEP (calculated)
5.032
GRAVY (calculated)
-0.826
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEWDNQQQP SNNPSSNLQG IDVNGGSGSG GMYVKVMTDE QLETLRKQIA IYATICERLV EMHKTLTSQQ DLAGRVGGLY ADPTFGHKMT GGRQRWTPTP
101: VQLQILERIF DQGIGTPSKQ KIKDITEELS QHGQIAEQNV YNWFQNRRAR SKRKQHGGGG VGSSSNNNNG ESEVEAETET VNEKRKMPES LLVFPDGNKN
201: AIGTTSATSP RPEDLYFQSP EMSSDLDLLG VLSNPRDEHF VGKMGLSESY NMYDHVEDYG M
101: VQLQILERIF DQGIGTPSKQ KIKDITEELS QHGQIAEQNV YNWFQNRRAR SKRKQHGGGG VGSSSNNNNG ESEVEAETET VNEKRKMPES LLVFPDGNKN
201: AIGTTSATSP RPEDLYFQSP EMSSDLDLLG VLSNPRDEHF VGKMGLSESY NMYDHVEDYG M
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.