Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P17980_001 | Banana | nucleus | 60.42 | 72.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 67.14 | 66.9 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 51.24 | 61.97 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 36.04 | 61.82 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 42.4 | 56.87 |
| CDY41648 | Canola | nucleus | 33.22 | 54.97 |
| KRH60910 | Soybean | nucleus | 39.93 | 54.33 |
| GSMUA_Achr10P... | Banana | nucleus | 51.59 | 53.48 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 41.34 | 53.18 |
| KRH51590 | Soybean | nucleus | 39.22 | 50.68 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 49.82 | 50.54 |
| Solyc02g082670.2.1 | Tomato | nucleus | 47.35 | 48.91 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 40.64 | 48.12 |
| PGSC0003DMT400003980 | Potato | nucleus | 46.64 | 48.0 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 39.58 | 47.46 |
| KRH70496 | Soybean | nucleus | 43.11 | 46.56 |
| Bra010531.1-P | Field mustard | nucleus | 38.16 | 45.76 |
| CDX75511 | Canola | nucleus | 40.99 | 45.31 |
| AT4G35550.1 | Thale cress | nucleus | 42.76 | 45.15 |
| Bra011623.1-P | Field mustard | nucleus | 40.99 | 44.96 |
| CDY24814 | Canola | nucleus | 37.81 | 44.77 |
| KRH01611 | Soybean | nucleus | 41.7 | 44.36 |
| CDX69148 | Canola | nucleus | 41.34 | 44.15 |
| CDY40623 | Canola | nucleus | 40.99 | 44.11 |
| CDX72546 | Canola | nucleus | 40.64 | 44.06 |
| Bra017720.1-P | Field mustard | nucleus | 40.28 | 43.02 |
| KRH36192 | Soybean | nucleus | 42.4 | 42.7 |
| KRG90565 | Soybean | nucleus | 41.7 | 41.55 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 11.31 | 25.0 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 10.25 | 20.28 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 12.37 | 19.02 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 12.01 | 17.53 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 12.37 | 17.5 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 11.31 | 16.93 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 11.31 | 16.58 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 10.95 | 16.32 |
| GSMUA_Achr10P... | Banana | nucleus | 13.43 | 15.57 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 12.01 | 14.53 |
| GSMUA_Achr10P... | Banana | nucleus | 11.66 | 14.16 |
| GSMUA_Achr10P... | Banana | nucleus | 12.37 | 13.16 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 15.55 | 11.37 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 12.37 | 11.22 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 12.37 | 10.94 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 12.01 | 10.73 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 16.25 | 10.29 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 13.07 | 10.19 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 13.43 | 9.05 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 7.42 | 8.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr3G14840_001 | EnsemblPlants:GSMUA_Achr3P14840_001 |
| EnsemblPlants:GSMUA_Achr3T14840_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0SEQ0 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002962E29 |
| SEG:seg | : | : | : | : | : |
Description
WUSCHEL-related homeobox 8 [Source:GMGC_GENE;Acc:GSMUA_Achr3G14840_001]
Coordinates
chr3:+:15216695..15220015
Molecular Weight (calculated)
31765.1 Da
IEP (calculated)
5.923
GRAVY (calculated)
-0.849
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MQWEKPSGGG GDDERNDDVR EGRGRGVGEA GAEGEGVGEG ILCVKVMTDE QMEVLRRQIA VYSTICEKLV EMHKAITAHH DSLAALGMRV GGIYNDPLMA
101: SGNNKITGRQ RWTPTTVQLQ ILEAMFNQDN GMPSKQKIKE ITIELSQHGQ ISESNVTNWF QNRKARSKRK QMAALPSNTE SETLNEKKPK PNQNHHDDLP
201: ISSDNNPIRD MQINTEIHSL EWEPNQAHGI HLSNDSSKAS SGSGHTTFYD NILSTPRYDH LMEKFDVRYF SPYHAEESYD IMG
101: SGNNKITGRQ RWTPTTVQLQ ILEAMFNQDN GMPSKQKIKE ITIELSQHGQ ISESNVTNWF QNRKARSKRK QMAALPSNTE SETLNEKKPK PNQNHHDDLP
201: ISSDNNPIRD MQINTEIHSL EWEPNQAHGI HLSNDSSKAS SGSGHTTFYD NILSTPRYDH LMEKFDVRYF SPYHAEESYD IMG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.