Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G514000.1 | Wheat | plastid | 46.15 | 46.15 |
| TraesCS2D01G515600.1 | Wheat | plastid | 45.3 | 44.73 |
| TraesCS2B01G542600.1 | Wheat | plastid | 45.3 | 44.73 |
| Os04t0649400-01 | Rice | plastid | 44.87 | 44.49 |
| OQU82449 | Sorghum | plastid | 44.02 | 42.04 |
| Zm00001d026453_P001 | Maize | plastid | 44.44 | 41.6 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 19.66 | 35.94 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 19.23 | 31.47 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 23.5 | 29.1 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 23.93 | 29.02 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 22.22 | 28.26 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 22.22 | 26.8 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 20.94 | 25.79 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 21.79 | 25.5 |
| GSMUA_Achr10P... | Banana | nucleus | 23.5 | 23.61 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 12.82 | 18.18 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 14.96 | 16.59 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 14.96 | 15.91 |
| GSMUA_Achr10P... | Banana | nucleus | 16.24 | 15.57 |
| GSMUA_Achr10P... | Banana | nucleus | 15.81 | 13.91 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 13.68 | 13.5 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 17.52 | 12.93 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 12.82 | 12.82 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 14.53 | 12.01 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 15.38 | 11.54 |
| GSMUA_Achr10P... | Banana | nucleus | 12.82 | 10.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.25 | 10.92 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 17.52 | 10.59 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 14.1 | 10.31 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 15.38 | 9.92 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 17.95 | 9.4 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 15.81 | 8.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010067 | GO:GO:0010087 | GO:GO:0051301 | EnsemblPlantsGene:GSMUA_Achr8G15620_001 | EnsemblPlants:GSMUA_Achr8P15620_001 | EnsemblPlants:GSMUA_Achr8T15620_001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0TQR5 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF263 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00029523DD | SEG:seg |
Description
WUSCHEL-related homeobox 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G15620_001]
Coordinates
chr8:-:13254598..13257505
Molecular Weight (calculated)
26393.6 Da
IEP (calculated)
10.620
GRAVY (calculated)
-0.628
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVHQLTLGL WEQLPSSPST SSSLSSSSTN HHKRLRPLAP KLSSSAVVST TTMAEIISLK SFNSPLTTKF ASRNRRCCLQ MQLQSGGTRW NPMPEQIKLL
101: EALYQGGMRT PNPVQIERIT AELSKYGRIE GKNVFYWFQN HKARERQKQK RSALLALATN SASLPNLLKV RTKHGFSPHA HFLHDGSCKR KCRSWGSLEP
201: DVEDSGPGDR TLELFPLHPE WKQVGYEKES INIS
101: EALYQGGMRT PNPVQIERIT AELSKYGRIE GKNVFYWFQN HKARERQKQK RSALLALATN SASLPNLLKV RTKHGFSPHA HFLHDGSCKR KCRSWGSLEP
201: DVEDSGPGDR TLELFPLHPE WKQVGYEKES INIS
001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
Arabidopsis Description
WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.