Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 46.88 | 61.48 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 38.44 | 52.12 |
| GSMUA_Achr10P... | Banana | nucleus | 42.5 | 51.13 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 49.38 | 50.64 |
| PGSC0003DMT400069529 | Potato | nucleus | 38.12 | 49.8 |
| Solyc06g072890.1.1 | Tomato | nucleus | 39.69 | 48.11 |
| Bra036446.1-P | Field mustard | nucleus | 37.81 | 45.66 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 45.0 | 45.43 |
| KRG94925 | Soybean | nucleus | 39.38 | 45.0 |
| CDY38461 | Canola | nucleus | 37.81 | 44.16 |
| Bra002108.1-P | Field mustard | nucleus | 37.5 | 43.96 |
| CDY16883 | Canola | nucleus | 37.81 | 43.84 |
| AT5G17810.2 | Thale cress | nucleus | 36.56 | 43.66 |
| Bra023638.1-P | Field mustard | nucleus | 37.5 | 43.64 |
| KRH64971 | Soybean | nucleus | 39.69 | 43.05 |
| CDY21173 | Canola | nucleus | 38.75 | 42.91 |
| CDY29949 | Canola | nucleus | 38.75 | 42.91 |
| CDY66087 | Canola | nucleus | 37.19 | 42.5 |
| CDY02686 | Canola | nucleus | 37.5 | 42.4 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 47.19 | 41.6 |
| Bra031980.1-P | Field mustard | nucleus | 39.69 | 39.44 |
| CDY51756 | Canola | plastid | 40.0 | 39.26 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 40.0 | 39.26 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 51.25 | 39.05 |
| CDY50656 | Canola | nucleus | 40.0 | 37.76 |
| CDY72488 | Canola | nucleus, plastid | 27.5 | 35.63 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 9.69 | 24.22 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 11.56 | 22.42 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 9.38 | 20.98 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 24.38 | 20.16 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 10.94 | 19.02 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 11.25 | 18.56 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 10.94 | 18.52 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 13.44 | 18.38 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 25.31 | 18.12 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 10.62 | 17.62 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 11.56 | 17.54 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 10.94 | 17.5 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 10.31 | 17.37 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 12.81 | 17.3 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 11.56 | 16.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.75 | 15.49 |
| GSMUA_Achr10P... | Banana | nucleus | 12.19 | 14.29 |
| GSMUA_Achr10P... | Banana | nucleus | 10.31 | 14.16 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 10.31 | 14.1 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 10.94 | 12.37 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr3G09460_001 | EnsemblPlants:GSMUA_Achr3P09460_001 |
| EnsemblPlants:GSMUA_Achr3T09460_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0SD63 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF185 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002954D31 |
| SEG:seg | : | : | : | : | : |
Description
WUSCHEL-related homeobox 11 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09460_001]
Coordinates
chr3:-:6834913..6836476
Molecular Weight (calculated)
35058.5 Da
IEP (calculated)
7.499
GRAVY (calculated)
-0.099
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIEQTQDGK SSLNSGSNPD HAVVEPVRSR WTPKPEQVLI LESIFNSGMV NPPKEETVRI RKLLEKFGAV ADANVFYWFQ NRRSRSRRRQ RQLQAGLAAD
101: PGAAAAASCH FGTAVLQEPA SSCSFVTSPS SSTGGFFPSS SYASSCSSSS YASFVGGDSV DDLFSISRHM GIAKSTQNPF ECCSSDAPQL QYQPGTIVVF
201: INGVLSEVPR GAFDLRAMFG HNVMLVHSSG ELLPVNEYGF LMQSLQMGES YFLVRRSPSS LTPCNTLLFP FLSLSIYLYP SFEVCMTNPI SHLSFVAGFF
301: TYLARLPLHL PWPRGGSSYH
101: PGAAAAASCH FGTAVLQEPA SSCSFVTSPS SSTGGFFPSS SYASSCSSSS YASFVGGDSV DDLFSISRHM GIAKSTQNPF ECCSSDAPQL QYQPGTIVVF
201: INGVLSEVPR GAFDLRAMFG HNVMLVHSSG ELLPVNEYGF LMQSLQMGES YFLVRRSPSS LTPCNTLLFP FLSLSIYLYP SFEVCMTNPI SHLSFVAGFF
301: TYLARLPLHL PWPRGGSSYH
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.