Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P25530_001 | Banana | nucleus | 73.94 | 57.82 |
| CDY41648 | Canola | nucleus | 53.33 | 51.46 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 66.67 | 50.0 |
| KRH60910 | Soybean | nucleus | 59.39 | 47.12 |
| KRH51590 | Soybean | nucleus | 58.79 | 44.29 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 62.42 | 43.46 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 61.82 | 42.68 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 59.39 | 41.88 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 58.79 | 41.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 68.48 | 39.79 |
| Solyc02g082670.2.1 | Tomato | nucleus | 63.03 | 37.96 |
| GSMUA_Achr10P... | Banana | nucleus | 61.82 | 37.36 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 63.03 | 37.28 |
| PGSC0003DMT400003980 | Potato | nucleus | 61.82 | 37.09 |
| CDX75511 | Canola | nucleus | 56.97 | 36.72 |
| KRH70496 | Soybean | nucleus | 58.18 | 36.64 |
| Bra010531.1-P | Field mustard | nucleus | 52.12 | 36.44 |
| Bra011623.1-P | Field mustard | nucleus | 56.97 | 36.43 |
| AT4G35550.1 | Thale cress | nucleus | 58.79 | 36.19 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 61.82 | 36.04 |
| CDX72546 | Canola | nucleus | 56.97 | 36.02 |
| CDY24814 | Canola | nucleus | 52.12 | 35.98 |
| KRH36192 | Soybean | nucleus | 60.61 | 35.59 |
| CDX69148 | Canola | nucleus | 56.36 | 35.09 |
| CDY40623 | Canola | nucleus | 55.76 | 34.98 |
| KRH01611 | Soybean | nucleus | 56.36 | 34.96 |
| Bra017720.1-P | Field mustard | nucleus | 55.15 | 34.34 |
| KRG90565 | Soybean | nucleus | 58.79 | 34.15 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 16.97 | 21.88 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 17.58 | 20.28 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 16.97 | 14.74 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 16.36 | 14.67 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 16.36 | 14.29 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 16.36 | 13.99 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 16.36 | 13.92 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 16.36 | 13.5 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 18.18 | 12.82 |
| GSMUA_Achr10P... | Banana | nucleus | 18.79 | 12.7 |
| GSMUA_Achr10P... | Banana | nucleus | 17.58 | 12.45 |
| GSMUA_Achr10P... | Banana | nucleus | 19.39 | 12.03 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 22.42 | 11.56 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 20.61 | 10.9 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 24.24 | 10.34 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 21.21 | 9.64 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 24.85 | 9.17 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 17.58 | 9.15 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 21.21 | 8.33 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 8.48 | 5.62 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr4G29470_001 | EnsemblPlants:GSMUA_Achr4P29470_001 |
| EnsemblPlants:GSMUA_Achr4T29470_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0ST59 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000294F627 |
| SEG:seg | : | : | : | : | : |
Description
WUSCHEL-related homeobox 8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G29470_001]
Coordinates
chr4:-:27415039..27416056
Molecular Weight (calculated)
18468.6 Da
IEP (calculated)
7.577
GRAVY (calculated)
-0.797
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGAAEEGV LCAKVMTDEQ MEVLRSQISA YATICEQLVE MHRTMTAQQD SLSGTRSSHL FADQPSGGAK ISAKQRWTPT AVQVRILESI FYHGNGTPRK
101: QRIKEITSEL SQHGQVSETN VYNWFQNRRA RSKRKQAFAA PSNTESEAEE ESPSEKKAKK EDAFT
101: QRIKEITSEL SQHGQVSETN VYNWFQNRRA RSKRKQAFAA PSNTESEAEE ESPSEKKAKK EDAFT
001: MVKKKKEKEK SKEIEEMDRE IQNGAYSGRV MTEEQMEILR KQIAVYAVIC DQLVLLHNSL SSYHPLSSGV RPMVGGYFDP MGASSSSHRI STRHRWTPTS
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGKK
201: II
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGKK
201: II
Arabidopsis Description
WOX14WUSCHEL-related homeobox 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.