Factsheet for GSMUA_Achr9P05010_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	42.98	63.93
GSMUA_Achr10P...	Banana	nucleus	41.6	56.77
TraesCS2B01G117900.1	Wheat	nucleus	38.02	52.87
Os07t0684900-01	Rice	nucleus	38.02	52.67
TraesCS2A01G100700.1	Wheat	nucleus	38.29	52.45
TraesCS2D01G100200.1	Wheat	nucleus	37.74	51.89
VIT_08s0056g01200.t01	Wine grape	nucleus	33.61	51.69
Zm00001d022524_P001	Maize	nucleus	36.64	51.35
GSMUA_Achr5P27730_001	Banana	nucleus	42.98	50.0
PGSC0003DMT400069529	Potato	nucleus	32.78	48.57
TraesCS4D01G176400.1	Wheat	nucleus	40.77	48.37
TraesCS4B01G174400.1	Wheat	nucleus	40.77	47.9
TraesCS4A01G130200.1	Wheat	nucleus	40.5	47.88
KXG39473	Sorghum	nucleus	41.32	47.77
Solyc06g072890.1.1	Tomato	nucleus	34.71	47.73
GSMUA_Achr3P09460_001	Banana	nucleus	41.6	47.19
Zm00001d047559_P001	Maize	nucleus	40.22	46.35
Bra036446.1-P	Field mustard	nucleus	33.06	45.28
TraesCS3D01G073300.1	Wheat	nucleus	32.23	44.83
HORVU3Hr1G013290.3	Barley	nucleus	32.23	44.83
KRG94925	Soybean	nucleus	34.44	44.64
Zm00001d028986_P001	Maize	nucleus	39.67	44.58
GSMUA_Achr6P15910_001	Banana	nucleus	38.84	44.48
TraesCS3B01G087800.1	Wheat	nucleus	31.96	44.44
TraesCS3A01G073500.1	Wheat	nucleus	31.68	44.23
CDY38461	Canola	nucleus	33.06	43.8
Bra002108.1-P	Field mustard	nucleus	32.78	43.59
CDY16883	Canola	nucleus	32.78	43.12
KRH64971	Soybean	nucleus	34.99	43.05
AT5G17810.2	Thale cress	nucleus	31.68	42.91
KXG24798	Sorghum	nucleus	32.51	42.75
HORVU3Hr1G013330.1	Barley	nucleus	22.59	42.27
CDY21173	Canola	nucleus	33.61	42.21
CDY29949	Canola	nucleus	33.61	42.21
Os08t0242400-01	Rice	nucleus	32.78	41.9
Bra023638.1-P	Field mustard	nucleus	31.68	41.82
GSMUA_Achr8P01590_001	Banana	nucleus	48.21	41.67
CDY02686	Canola	nucleus	32.23	41.34
Os03t0325600-01	Rice	nucleus	40.22	41.01
CDY66087	Canola	nucleus	31.13	40.36
OQU90491	Sorghum	nucleus	28.65	40.0
AT3G03660.3	Thale cress	nucleus, plastid	34.99	38.96
Zm00001d024410_P001	Maize	nucleus	31.41	38.78
Bra031980.1-P	Field mustard	nucleus	32.23	36.34
CDY72488	Canola	nucleus, plastid	24.52	36.03
CDY51756	Canola	plastid	31.96	35.58
CDY50656	Canola	nucleus	32.51	34.81
HORVU4Hr1G051530.5	Barley	nucleus	31.13	32.75
GSMUA_Achr8P02040_001	Banana	nucleus	7.71	21.88
GSMUA_Achr7P07430_001	Banana	nucleus	8.54	21.68
GSMUA_Achr9P06660_001	Banana	nucleus	22.86	21.45
GSMUA_Achr4P29470_001	Banana	nucleus	9.64	21.21
GSMUA_Achr4P30610_001	Banana	nucleus	9.92	19.57
GSMUA_Achr8P27170_001	Banana	nucleus	22.86	18.57
GSMUA_Achr2P16080_001	Banana	nucleus	9.92	18.56
GSMUA_Achr9P04090_001	Banana	nucleus	9.64	18.52
GSMUA_Achr7P14860_001	Banana	nucleus	9.64	18.42
GSMUA_Achr7P18230_001	Banana	nucleus	9.37	17.62
GSMUA_Achr4P25530_001	Banana	nucleus	10.19	17.54
GSMUA_Achr5P29220_001	Banana	nucleus	9.64	17.5
GSMUA_Achr1P17980_001	Banana	nucleus	10.74	16.46
GSMUA_Achr7P04050_001	Banana	nucleus	10.19	15.81
GSMUA_Achr5P11080_001	Banana	nucleus	9.37	15.45
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	9.92	15.38
GSMUA_Achr10P...	Banana	nucleus	11.02	14.65
GSMUA_Achr10P...	Banana	nucleus	9.09	14.16
GSMUA_AchrUn_...	Banana	nucleus	10.74	13.73
GSMUA_Achr3P14840_001	Banana	nucleus	10.19	13.07

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr9G05010_001	EnsemblPlants:GSMUA_Achr9P05010_001
EnsemblPlants:GSMUA_Achr9T05010_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0TXL0	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF185	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000296A611
SEG:seg	:	:	:	:	:

Description

Putative WUSCHEL-related homeobox 10 [Source:GMGC_GENE;Acc:GSMUA_Achr9G05010_001]

Coordinates

chr9:+:3260053..3261554

Molecular Weight (calculated)

40224.5 Da

IEP (calculated)

7.651

GRAVY (calculated)

-0.331

Length

363 amino acids

Sequence
(BLAST)

001: MKNTLVQSIS STDCPRPIYN SPHVCTCKPL PFPHGNPSID FVLLPRHSNY PPATSSMGDH GRDRNSSSTL HRSTADSTET EPVRTRWMPK PEQILILESI
101: FNSGMVNPPK EETVRIRKLL QKFGAVGDAN VFYWFQNRRS RSRRRQRQLQ ASLMADPRAA RGVTQQAGGG VLPHEPPTSS SSSSTSSNNS SFPCSSSASS
201: SPSSYNFVMD DGSDDLFSMI SSQTPFMCSS HVPRSHHMFA WLHETLNSFP SFRAFCSMTF YLIGSLDPWH HKSVWDINAL TLNQVTLHLV LIIECMDSGT
301: ITVFIDGVPS EVPRGPIDTR AMFGQNVMLV HSSGELLPVN EHGVVVQSLQ MGESYFLVSN STT

Best Arabidopsis Sequence Match ( AT3G03660.1 )
(BLAST)

001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT

Arabidopsis Description

WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.