Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G117900.1 | Wheat | nucleus | 98.49 | 100.0 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 98.11 | 98.48 |
| GSMUA_Achr10P... | Banana | nucleus | 55.85 | 60.66 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 65.28 | 56.35 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 45.66 | 51.27 |
| PGSC0003DMT400069529 | Potato | nucleus | 45.28 | 48.98 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 47.92 | 48.85 |
| Bra036446.1-P | Field mustard | nucleus | 48.68 | 48.68 |
| GSMUA_Achr10P... | Banana | nucleus | 47.17 | 46.99 |
| Solyc06g072890.1.1 | Tomato | nucleus | 46.42 | 46.59 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 54.34 | 46.15 |
| KRG94925 | Soybean | nucleus | 48.68 | 46.07 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 54.72 | 45.74 |
| CDY29949 | Canola | nucleus | 49.43 | 45.33 |
| CDY21173 | Canola | nucleus | 49.43 | 45.33 |
| CDY38461 | Canola | nucleus | 46.79 | 45.26 |
| Bra002108.1-P | Field mustard | nucleus | 46.04 | 44.69 |
| KRH64971 | Soybean | nucleus | 49.43 | 44.41 |
| CDY16883 | Canola | nucleus | 45.66 | 43.84 |
| AT5G17810.2 | Thale cress | nucleus | 44.15 | 43.66 |
| Bra023638.1-P | Field mustard | nucleus | 44.91 | 43.27 |
| CDY02686 | Canola | nucleus | 45.66 | 42.76 |
| CDY66087 | Canola | nucleus | 43.77 | 41.43 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 49.06 | 39.88 |
| CDY72488 | Canola | nucleus, plastid | 36.23 | 38.87 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 52.45 | 38.29 |
| Bra031980.1-P | Field mustard | nucleus | 46.42 | 38.2 |
| CDY51756 | Canola | plastid | 46.79 | 38.04 |
| CDY50656 | Canola | nucleus | 46.42 | 36.28 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 51.7 | 32.62 |
| TraesCS2A01G514000.1 | Wheat | plastid | 14.34 | 16.24 |
| TraesCS5A01G157300.1 | Wheat | nucleus | 14.72 | 16.18 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 15.85 | 15.85 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 12.45 | 15.57 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 27.55 | 15.02 |
| TraesCS2A01G491900.1 | Wheat | mitochondrion, plastid | 15.47 | 13.31 |
| TraesCS3A01G247200.1 | Wheat | nucleus, plastid | 24.91 | 12.82 |
| TraesCS1A01G052000.1 | Wheat | nucleus, plastid | 12.45 | 12.55 |
| TraesCS3A01G358100.1 | Wheat | nucleus | 13.96 | 12.29 |
| TraesCS3A01G358200.1 | Wheat | nucleus | 12.45 | 11.46 |
| TraesCS3A01G358400.1 | Wheat | nucleus | 12.45 | 11.38 |
| TraesCS5A01G085000.1 | Wheat | nucleus | 12.83 | 10.69 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G100700.1 | EnsemblPlantsGene:TraesCS2A01G100700 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF280 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | MapMan:15.5.3.6 |
Description
No Description!
Coordinates
chr2A:+:53782698..53784798
Molecular Weight (calculated)
27817.5 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.363
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGGGNSPD LQPAEPVRSR WTPKPEQILI LESIFNSGMV NPPKDETVRI RKLLERFGAV GDANVFYWFQ NRRSRSRRRQ RQLQAQAQAQ AQAQAQASAA
101: SSGSPPAPGG LGSAASSTSL GLFAHGGAAY SSSSSSSSWP PSPPSVGMVG DMDQCGGGDD LFAISRQMGY ADGGGGGSGS SSFSAAAAQQ QQQQLYYSCQ
201: PAGITVFING VATEVPRGPM DLRSMFGHDV MLVHSSGGLL PVDDYGVLMQ SLQMGESYYL VARSN
101: SSGSPPAPGG LGSAASSTSL GLFAHGGAAY SSSSSSSSWP PSPPSVGMVG DMDQCGGGDD LFAISRQMGY ADGGGGGSGS SSFSAAAAQQ QQQQLYYSCQ
201: PAGITVFING VATEVPRGPM DLRSMFGHDV MLVHSSGGLL PVDDYGVLMQ SLQMGESYYL VARSN
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.