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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031980.1-P Field mustard nucleus 92.02 93.17
CDY50656 Canola nucleus 88.65 85.25
CDY21173 Canola nucleus 69.33 78.2
CDY29949 Canola nucleus 69.33 78.2
AT3G03660.3 Thale cress nucleus, plastid 70.55 70.55
CDY72488 Canola nucleus, plastid 52.76 69.64
CDY16883 Canola nucleus 53.68 63.41
CDY38461 Canola nucleus 52.76 62.77
CDY02686 Canola nucleus 53.99 62.19
CDY66087 Canola nucleus 52.15 60.71
VIT_08s0056g01200.t01 Wine grape nucleus 40.49 55.93
PGSC0003DMT400069529 Potato nucleus 39.26 52.24
Solyc06g072890.1.1 Tomato nucleus 39.88 49.24
GSMUA_Achr10P... Banana nucleus 36.81 49.18
KRG94925 Soybean nucleus 42.02 48.93
Os07t0684900-01 Rice nucleus 38.34 47.71
TraesCS2B01G117900.1 Wheat nucleus 38.04 47.51
KRH64971 Soybean nucleus 42.64 47.12
TraesCS2D01G100200.1 Wheat nucleus 38.04 46.97
TraesCS2A01G100700.1 Wheat nucleus 38.04 46.79
Zm00001d022524_P001 Maize nucleus 37.12 46.72
TraesCS4B01G174400.1 Wheat nucleus 40.49 42.72
TraesCS4A01G130200.1 Wheat nucleus 40.18 42.67
TraesCS4D01G176400.1 Wheat nucleus 39.88 42.48
Zm00001d047559_P001 Maize nucleus 40.18 41.59
KXG39473 Sorghum nucleus 39.88 41.4
Os08t0242400-01 Rice nucleus 35.89 41.2
GSMUA_Achr3P09460_001 Banana nucleus 39.26 40.0
TraesCS3A01G073500.1 Wheat nucleus 31.9 40.0
Zm00001d028986_P001 Maize nucleus 39.57 39.94
TraesCS3D01G073300.1 Wheat nucleus 31.9 39.85
OQU90491 Sorghum nucleus 31.6 39.62
HORVU3Hr1G013290.3 Barley nucleus 31.6 39.46
TraesCS3B01G087800.1 Wheat nucleus 31.6 39.46
KXG24798 Sorghum nucleus 33.13 39.13
GSMUA_Achr10P... Banana nucleus 31.29 38.35
HORVU3Hr1G013330.1 Barley nucleus 22.39 37.63
GSMUA_Achr6P15910_001 Banana nucleus 35.58 36.59
GSMUA_Achr5P27730_001 Banana nucleus 34.97 36.54
Os03t0325600-01 Rice nucleus 39.26 35.96
Zm00001d024410_P001 Maize nucleus 31.9 35.37
GSMUA_Achr9P05010_001 Banana nucleus, plastid 35.58 31.96
HORVU4Hr1G051530.5 Barley nucleus 33.13 31.3
GSMUA_Achr8P01590_001 Banana nucleus 36.81 28.57
CDX87744 Canola nucleus 24.85 25.31
CDY48780 Canola nucleus 24.85 25.31
CDY17211 Canola nucleus 29.14 24.36
CDY69228 Canola nucleus 28.53 23.85
CDX79549 Canola nucleus 27.91 22.92
CDY70975 Canola nucleus 10.74 21.08
CDY01358 Canola nucleus 8.59 21.05
CDX93197 Canola nucleus 12.27 20.51
CDY31870 Canola nucleus 12.27 20.51
CDY71075 Canola nucleus 7.06 19.01
CDY29511 Canola nucleus 11.35 18.23
CDY02582 Canola nucleus 6.75 18.18
CDY65899 Canola nucleus 11.35 17.7
CDY01007 Canola nucleus 9.82 16.75
CDY08539 Canola nucleus 9.2 15.71
CDX69148 Canola nucleus 12.58 15.47
CDY41648 Canola nucleus 7.98 15.2
CDY14103 Canola nucleus 8.9 15.18
CDY04966 Canola nucleus 8.9 15.18
CDX98862 Canola nucleus 8.9 15.1
CDX70130 Canola nucleus 8.9 15.1
CDX72546 Canola nucleus 11.96 14.94
CDY41086 Canola nucleus 11.96 14.61
CDX75511 Canola nucleus 11.35 14.45
CDY40623 Canola nucleus 11.66 14.45
CDY25659 Canola nucleus 11.04 14.34
CDY43848 Canola nucleus 11.04 14.34
CDY30337 Canola nucleus 13.8 14.24
CDY24814 Canola nucleus 10.43 14.23
CDY40847 Canola nucleus 10.74 13.73
CDY29212 Canola nucleus 12.27 13.61
CDY47803 Canola nucleus 12.58 13.58
CDY38144 Canola nucleus 12.58 13.58
CDY17046 Canola nucleus 10.43 13.28
CDY31716 Canola nucleus 9.51 13.25
CDY55370 Canola nucleus 12.27 13.24
CDX77191 Canola nucleus 9.51 13.14
CDY33728 Canola nucleus 10.74 12.73
CDX95764 Canola nucleus 8.59 12.61
CDX81686 Canola nucleus 11.04 12.41
CDX83299 Canola nucleus 8.59 12.39
CDY02885 Canola nucleus 7.36 12.06
CDY66658 Canola nucleus 12.58 11.68
CDY51928 Canola nucleus 12.58 11.61
CDX75955 Canola nucleus 12.27 11.43
CDX80277 Canola nucleus 7.36 11.43
CDY32648 Canola nucleus 6.13 11.43
CDY33030 Canola nucleus 7.36 11.43
CDX92182 Canola nucleus 12.27 11.4
CDY29211 Canola mitochondrion 4.6 10.07
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.6GO:A0A078IP65UniProt:A0A078IP65EnsemblPlants:CDY51756ProteinID:CDY51756
ProteinID:CDY51756.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634EnsemblPlantsGene:GSBRNA2T00004123001InterPro:Homeobox-like_sfInterPro:Homeobox_dom
InterPro:IPR001356PFAM:PF00046PFscan:PS50071PANTHER:PTHR24326PANTHER:PTHR24326:SF185SMART:SM00389
SUPFAM:SSF46689UniParc:UPI0004EE6826SEG:seg:::
Description
BnaA05g32800DBnaA05g32800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP65]
Coordinates
chrLK033024:+:53435..54982
Molecular Weight (calculated)
35663.1 Da
IEP (calculated)
7.149
GRAVY (calculated)
-0.285
Length
326 amino acids
Sequence
(BLAST)
001: MDQGQTPHST TGQSHSPSSS ASGSTSTEPV RSRWSPKPEQ ILILESIFNS GMVNPPKEET VRIRKMLEKF GKVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAATTTTNTC DQTMMVSNNL PQHSGSDLGF GGCSTSNYLF ASSSSYGAGC DNHSNNGMEN LLTMSGEMGY HGANQHHYNY HSSNVESILC PSEQSSNYHY
201: QQALLIIFPI LPNILYLRAR SIMVFINGVP TEVTSGGIDM KVTFGEDLVL VNSSGVPLPT DQFGFLMHSL QHGEAYFLVI TLSLSLPPPS FPSPTLSLSL
301: SLSLSLSLSL SLSLSLSPHF DVENRK
Best Arabidopsis Sequence Match ( AT3G03660.4 )
(BLAST)
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVIILTQI YFNFLVSFVC FIADRIPREY ICYIVWF
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.