Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29511 | Canola | nucleus | 94.26 | 97.04 |
| AT1G20700.1 | Thale cress | nucleus | 76.08 | 75.36 |
| CDY01358 | Canola | nucleus | 44.5 | 69.92 |
| CDY31870 | Canola | nucleus | 63.16 | 67.69 |
| CDX93197 | Canola | nucleus | 63.16 | 67.69 |
| CDY41648 | Canola | nucleus | 36.84 | 45.03 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 40.67 | 40.28 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 23.92 | 38.46 |
| TraesCSU01G204800.1 | Wheat | nucleus | 26.79 | 35.9 |
| CDY24814 | Canola | nucleus | 40.19 | 35.15 |
| CDX75511 | Canola | nucleus | 42.11 | 34.38 |
| CDX72546 | Canola | nucleus | 42.58 | 34.1 |
| CDX69148 | Canola | nucleus | 42.11 | 33.21 |
| CDY40623 | Canola | nucleus | 41.63 | 33.08 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 40.19 | 32.18 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 40.19 | 31.94 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 40.67 | 31.72 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 40.19 | 31.7 |
| Os01t0818400-01 | Rice | nucleus | 39.71 | 31.09 |
| Zm00001d043076_P001 | Maize | nucleus | 40.19 | 30.77 |
| GSMUA_Achr10P... | Banana | nucleus | 39.71 | 30.4 |
| EES01660 | Sorghum | nucleus | 39.23 | 29.5 |
| Zm00001d012516_P001 | Maize | nucleus | 39.23 | 29.08 |
| CDY71075 | Canola | nucleus | 10.53 | 18.18 |
| CDY70975 | Canola | nucleus | 14.35 | 18.07 |
| CDY02582 | Canola | nucleus | 10.05 | 17.36 |
| CDY08539 | Canola | nucleus | 15.31 | 16.75 |
| CDY01007 | Canola | nucleus | 15.31 | 16.75 |
| CDY72488 | Canola | nucleus, plastid | 18.18 | 15.38 |
| CDY04966 | Canola | nucleus | 13.88 | 15.18 |
| CDY14103 | Canola | nucleus | 13.88 | 15.18 |
| CDX70130 | Canola | nucleus | 13.88 | 15.1 |
| CDX98862 | Canola | nucleus | 13.4 | 14.58 |
| CDY43848 | Canola | nucleus | 17.22 | 14.34 |
| CDY25659 | Canola | nucleus | 16.75 | 13.94 |
| CDY40847 | Canola | nucleus | 16.75 | 13.73 |
| CDY17046 | Canola | nucleus | 16.75 | 13.67 |
| CDX95764 | Canola | nucleus | 14.35 | 13.51 |
| CDY29949 | Canola | nucleus | 18.66 | 13.49 |
| CDY21173 | Canola | nucleus | 18.66 | 13.49 |
| CDX83299 | Canola | nucleus | 14.35 | 13.27 |
| CDY31716 | Canola | nucleus | 14.83 | 13.25 |
| CDY38461 | Canola | nucleus | 16.75 | 12.77 |
| CDX77191 | Canola | nucleus | 14.35 | 12.71 |
| CDY16883 | Canola | nucleus | 16.75 | 12.68 |
| CDY66087 | Canola | nucleus | 16.75 | 12.5 |
| CDY02686 | Canola | nucleus | 16.75 | 12.37 |
| CDX87744 | Canola | nucleus | 18.66 | 12.19 |
| CDY48780 | Canola | nucleus | 18.66 | 12.19 |
| CDY51756 | Canola | plastid | 17.7 | 11.35 |
| CDY41086 | Canola | nucleus | 14.35 | 11.24 |
| CDY50656 | Canola | nucleus | 18.18 | 11.21 |
| CDY69228 | Canola | nucleus | 20.57 | 11.03 |
| CDY17211 | Canola | nucleus | 20.57 | 11.03 |
| CDY29212 | Canola | nucleus | 15.31 | 10.88 |
| CDX79549 | Canola | nucleus | 20.57 | 10.83 |
| CDY47803 | Canola | nucleus | 15.31 | 10.6 |
| CDY33728 | Canola | nucleus | 13.88 | 10.55 |
| CDY55370 | Canola | nucleus | 14.83 | 10.26 |
| CDY38144 | Canola | nucleus | 14.83 | 10.26 |
| CDY30337 | Canola | nucleus | 15.31 | 10.13 |
| CDX81686 | Canola | nucleus | 13.4 | 9.66 |
| CDY33030 | Canola | nucleus | 9.57 | 9.52 |
| CDX80277 | Canola | nucleus | 9.57 | 9.52 |
| CDX75955 | Canola | nucleus | 15.79 | 9.43 |
| CDY66658 | Canola | nucleus | 15.79 | 9.4 |
| CDY51928 | Canola | nucleus | 15.79 | 9.35 |
| CDY32648 | Canola | nucleus | 7.66 | 9.14 |
| CDX92182 | Canola | nucleus | 15.31 | 9.12 |
| CDY02885 | Canola | nucleus | 8.13 | 8.54 |
| CDY29211 | Canola | mitochondrion | 1.91 | 2.68 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078JGS0 | UniProt:A0A078JGS0 | EnsemblPlants:CDY65899 | ProteinID:CDY65899 |
| ProteinID:CDY65899.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00050975001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EDC7F4 | : | : | : | : |
Description
BnaCnng49040DBnaCnng49040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGS0]
Coordinates
chrLK034993:-:17926..19067
Molecular Weight (calculated)
23620.5 Da
IEP (calculated)
5.376
GRAVY (calculated)
-0.767
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MERENQNGAY VGRGVMTEEQ METLRKQIAV YAVICEQLAL LHNSLSSFQP LSSGINPNGD GYFNPMVASS SAQRISTRNR WTPTSTQLQI LESIYEEKSG
101: TPNRRRIREI ATELSEHGQI TETNVYNWFQ NRRARSKRKQ PQTMATTDQA EDAAVTTDEK RSCGDSGGFE SYEHILFPSP DLGIEHLLSR GELSGDFNSY
201: TIADIKYKE
101: TPNRRRIREI ATELSEHGQI TETNVYNWFQ NRRARSKRKQ PQTMATTDQA EDAAVTTDEK RSCGDSGGFE SYEHILFPSP DLGIEHLLSR GELSGDFNSY
201: TIADIKYKE
001: MVKKKKEKEK SKEIEEMDRE IQNGAYSGRV MTEEQMEILR KQIAVYAVIC DQLVLLHNSL SSYHPLSSGV RPMVGGYFDP MGASSSSHRI STRHRWTPTS
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGIE
201: HLLSIGKFME T
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGIE
201: HLLSIGKFME T
Arabidopsis Description
WOX14WUSCHEL-related homeobox 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.