Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043076_P001 | Maize | nucleus | 91.37 | 93.04 |
| Os01t0818400-01 | Rice | nucleus | 75.9 | 79.03 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 70.5 | 73.96 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 69.42 | 73.95 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 67.99 | 71.86 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 69.06 | 71.64 |
| TraesCSU01G204800.1 | Wheat | nucleus | 39.21 | 69.87 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 28.06 | 60.0 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 49.28 | 57.32 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 48.2 | 56.78 |
| KRH60910 | Soybean | nucleus | 42.45 | 56.73 |
| VIT_18s0122g01140.t01 | Wine grape | nucleus | 56.83 | 56.63 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 41.73 | 54.98 |
| KRH51590 | Soybean | nucleus | 41.73 | 52.97 |
| Bra012245.1-P | Field mustard | nucleus | 25.18 | 52.63 |
| CDY01358 | Canola | nucleus | 25.18 | 52.63 |
| Solyc02g082670.2.1 | Tomato | nucleus | 51.8 | 52.55 |
| PGSC0003DMT400003980 | Potato | nucleus | 51.44 | 52.0 |
| KRH01611 | Soybean | nucleus | 46.04 | 48.12 |
| KRH36192 | Soybean | nucleus | 47.48 | 46.98 |
| KRH70496 | Soybean | nucleus | 43.88 | 46.56 |
| KRG90565 | Soybean | nucleus | 46.04 | 45.07 |
| AT1G20710.1 | Thale cress | nucleus | 29.86 | 42.13 |
| CDX93197 | Canola | nucleus | 28.42 | 40.51 |
| CDY31870 | Canola | nucleus | 28.42 | 40.51 |
| Bra025839.1-P | Field mustard | nucleus | 29.14 | 39.9 |
| CDY29511 | Canola | nucleus | 29.14 | 39.9 |
| CDY65899 | Canola | nucleus | 29.5 | 39.23 |
| AT1G20700.1 | Thale cress | nucleus | 29.5 | 38.86 |
| OQU87881 | Sorghum | nucleus | 11.87 | 15.14 |
| OQU82449 | Sorghum | plastid | 12.23 | 13.88 |
| OQU90491 | Sorghum | nucleus | 12.95 | 13.85 |
| KXG24798 | Sorghum | nucleus | 13.67 | 13.77 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 12.59 | 12.87 |
| OQU82902 | Sorghum | nucleus | 11.87 | 12.69 |
| KXG39473 | Sorghum | nucleus | 14.03 | 12.42 |
| OQU82514 | Sorghum | nucleus | 13.31 | 11.31 |
| OQU87830 | Sorghum | nucleus | 13.67 | 11.18 |
| KXG22537 | Sorghum | plastid | 15.47 | 8.67 |
| OQU87296 | Sorghum | plastid | 14.03 | 7.32 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:8055301 | UniProt:C5XN90 | EnsemblPlants:EES01660 | ProteinID:EES01660 |
| ProteinID:EES01660.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | SMART:SM00389 | EnsemblPlantsGene:SORBI_3003G336600 |
| SUPFAM:SSF46689 | UniParc:UPI0001A846E6 | RefSeq:XP_002456540.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:65980444..65986209
Molecular Weight (calculated)
30820.1 Da
IEP (calculated)
6.447
GRAVY (calculated)
-0.708
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWGDRAKAS AAAAAAAAAA AAADERSAVG EGLGGYVKVM TDEQMEVLRK QISIYATICE QLVDMHRTLT EHQDTIAGMR FSNLYCDPLI IPGGHKITAR
101: QRWQPTPMQL QILENIFDQG NGTPSKQKIK EITAELSHHG QISETNVYNW FQNRRARSKR KQAASLPNNA ESEAEVDEES LTDKKPKSDR PLQDHKAMGA
201: HSADRISGMH HFDTDHDQIG GMMYGCNDNG LRSSGSSGQM SFYENIMSNP RIDHFPGKVE SSRSFPHLQH GEGFDMFG
101: QRWQPTPMQL QILENIFDQG NGTPSKQKIK EITAELSHHG QISETNVYNW FQNRRARSKR KQAASLPNNA ESEAEVDEES LTDKKPKSDR PLQDHKAMGA
201: HSADRISGMH HFDTDHDQIG GMMYGCNDNG LRSSGSSGQM SFYENIMSNP RIDHFPGKVE SSRSFPHLQH GEGFDMFG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.