CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022524_P001	Maize	nucleus	73.85	74.13
Os07t0684900-01	Rice	nucleus	67.69	67.18
GSMUA_Achr10P...	Banana	nucleus	44.62	47.54
KXG39473	Sorghum	nucleus	54.23	44.9
VIT_08s0056g01200.t01	Wine grape	nucleus	37.69	41.53
KRG94925	Soybean	nucleus	42.31	39.29
Bra036446.1-P	Field mustard	nucleus	40.0	39.25
KXG24798	Sorghum	nucleus	40.38	38.04
PGSC0003DMT400069529	Potato	nucleus	35.77	37.96
GSMUA_Achr6P15910_001	Banana	nucleus	46.15	37.85
KRH64971	Soybean	nucleus	42.69	37.63
GSMUA_Achr5P27730_001	Banana	nucleus	44.62	37.18
CDY72488	Canola	nucleus, plastid	35.0	36.84
GSMUA_Achr10P...	Banana	nucleus	37.69	36.84
CDY29949	Canola	nucleus	40.77	36.68
CDY21173	Canola	nucleus	40.77	36.68
CDY38461	Canola	nucleus	38.46	36.5
Bra002108.1-P	Field mustard	nucleus	38.08	36.26
CDY16883	Canola	nucleus	38.08	35.87
Solyc06g072890.1.1	Tomato	nucleus	35.77	35.23
Bra023638.1-P	Field mustard	nucleus	36.92	34.91
AT5G17810.2	Thale cress	nucleus	35.77	34.7
CDY02686	Canola	nucleus	37.69	34.63
CDY66087	Canola	nucleus	36.15	33.57
AT3G03660.3	Thale cress	nucleus, plastid	40.0	31.9
Bra031980.1-P	Field mustard	nucleus	39.23	31.68
CDY51756	Canola	plastid	39.62	31.6
CDY50656	Canola	nucleus	39.23	30.09
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	40.0	28.65
GSMUA_Achr8P01590_001	Banana	nucleus	41.54	25.71
OQU82902	Sorghum	nucleus	14.23	14.23
KXG22537	Sorghum	plastid	26.92	14.11
OQU82449	Sorghum	plastid	13.08	13.88
OQU87881	Sorghum	nucleus	11.15	13.3
EES01660	Sorghum	nucleus	13.85	12.95
OQU77281	Sorghum	mitochondrion, nucleus	13.46	12.87
OQU82514	Sorghum	nucleus	16.15	12.84
OQU87296	Sorghum	plastid	25.0	12.2
OQU87830	Sorghum	nucleus	15.38	11.76

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	UniProt:A0A1W0W820	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275
GO:GO:0008150	GO:GO:0009653	GO:GO:0009791	GO:GO:0010311	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	EnsemblPlants:OQU90491	ProteinID:OQU90491	ProteinID:OQU90491.1	PFAM:PF00046	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF280	SMART:SM00389	EnsemblPlantsGene:SORBI_3002G421800	SUPFAM:SSF46689	UniParc:UPI0009DC850E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:76925180..76928257

Molecular Weight (calculated)

27608.2 Da

IEP (calculated)

9.601

GRAVY (calculated)

-0.361

Length

260 amino acids

Sequence
(BLAST)

001: MEGGLSPERH AAAEPVRSRW TPKPEQILIL ESIFNSGMVN PPKDETVRIR KLLERFGAVG DANVFYWFQN RRSRSRRRQR QLQAQAAAAA AAGSSSSSGS
101: PPTTGLAPGH AAASSTMGMF AHGAAYGSSA STSWPPSPPP SSAAMMGDLD YGGGDDLFAI SRQMGYANGG GSGSASSAAV AHHEQQLYYS PCQPGERAKS
201: HAMHACFVLS IQGSIDAWFS STSLPSSGKL NPFTASPFGS YPYWHARHNI IIFINTSQSI

Best Arabidopsis Sequence Match ( AT3G03660.2 )
(BLAST)

001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVPRQT

Arabidopsis Description

WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.