Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047559_P001 | Maize | nucleus | 91.08 | 90.79 |
| Zm00001d028986_P001 | Maize | nucleus | 90.45 | 87.93 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 81.53 | 82.85 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 80.57 | 82.68 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 80.57 | 82.41 |
| Os03t0325600-01 | Rice | nucleus | 81.53 | 71.91 |
| GSMUA_Achr10P... | Banana | nucleus | 50.64 | 65.16 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 65.61 | 59.71 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 40.76 | 54.24 |
| OQU90491 | Sorghum | nucleus | 44.9 | 54.23 |
| GSMUA_Achr10P... | Banana | nucleus | 43.63 | 51.5 |
| KRG94925 | Soybean | nucleus | 45.86 | 51.43 |
| Bra036446.1-P | Field mustard | nucleus | 42.36 | 50.19 |
| PGSC0003DMT400069529 | Potato | nucleus | 38.22 | 48.98 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 49.36 | 48.9 |
| KXG24798 | Sorghum | nucleus | 42.04 | 47.83 |
| KRH64971 | Soybean | nucleus | 44.9 | 47.8 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 47.13 | 47.44 |
| CDY29949 | Canola | nucleus | 43.31 | 47.06 |
| CDY21173 | Canola | nucleus | 43.31 | 47.06 |
| AT5G17810.2 | Thale cress | nucleus | 40.13 | 47.01 |
| Solyc06g072890.1.1 | Tomato | nucleus | 39.49 | 46.97 |
| CDY38461 | Canola | nucleus | 40.76 | 46.72 |
| Bra002108.1-P | Field mustard | nucleus | 40.13 | 46.15 |
| CDY16883 | Canola | nucleus | 40.13 | 45.65 |
| Bra023638.1-P | Field mustard | nucleus | 39.81 | 45.45 |
| CDY02686 | Canola | nucleus | 40.76 | 45.23 |
| CDY66087 | Canola | nucleus | 38.85 | 43.57 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 43.31 | 41.72 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 47.77 | 41.32 |
| CDY72488 | Canola | nucleus, plastid | 31.85 | 40.49 |
| Bra031980.1-P | Field mustard | nucleus | 41.08 | 40.06 |
| CDY51756 | Canola | plastid | 41.4 | 39.88 |
| CDY50656 | Canola | nucleus | 41.4 | 38.35 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 46.18 | 34.52 |
| OQU87881 | Sorghum | nucleus | 11.46 | 16.51 |
| KXG22537 | Sorghum | plastid | 24.52 | 15.52 |
| OQU82449 | Sorghum | plastid | 12.1 | 15.51 |
| OQU82902 | Sorghum | nucleus | 12.74 | 15.38 |
| OQU82514 | Sorghum | nucleus | 15.92 | 15.29 |
| EES01660 | Sorghum | nucleus | 12.42 | 14.03 |
| OQU87296 | Sorghum | plastid | 23.57 | 13.88 |
| OQU77281 | Sorghum | mitochondrion, nucleus | 11.78 | 13.6 |
| OQU87830 | Sorghum | nucleus | 11.78 | 10.88 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A1B6QNI1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlants:KXG39473 | ProteinID:KXG39473 | ProteinID:KXG39473.1 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF280 | SMART:SM00389 | EnsemblPlantsGene:SORBI_3001G386600 | SUPFAM:SSF46689 |
| UniParc:UPI00081ADDBD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:67421467..67424515
Molecular Weight (calculated)
32046.4 Da
IEP (calculated)
8.037
GRAVY (calculated)
-0.231
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSNSPDR QSSGGSPEER GSGGSGGRGG TGEPVRSRWT PKPEQILILE SIFNSGMVNP PKDETVRIRK LLERFGAVGD ANVFYWFQNR RSRSRRRQRQ
101: MQAAAAAAAA AAAANSAPAA SATAGGLPSG ALQYPLAMGG GTACQYEQQA SSSSSSGSTT GGSSLGQFAL GAGVPGTGGG GYFQASCGAS SPLATGLMGD
201: VDSSSGGSDD LFAISRQMGF AATSPVASAS VAPPSTTAHQ QPYYSCQSPA ATITVFINGV PMEVPRGPID LRAMFGQDVM LVHSTGALLP VNDYGILTQS
301: LQMGESYFLV ARPT
101: MQAAAAAAAA AAAANSAPAA SATAGGLPSG ALQYPLAMGG GTACQYEQQA SSSSSSGSTT GGSSLGQFAL GAGVPGTGGG GYFQASCGAS SPLATGLMGD
201: VDSSSGGSDD LFAISRQMGF AATSPVASAS VAPPSTTAHQ QPYYSCQSPA ATITVFINGV PMEVPRGPID LRAMFGQDVM LVHSTGALLP VNDYGILTQS
301: LQMGESYFLV ARPT
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.