Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G174400.1 | Wheat | nucleus | 71.35 | 82.2 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 70.51 | 82.03 |
| KXG39473 | Sorghum | nucleus | 71.91 | 81.53 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 70.22 | 81.43 |
| Zm00001d047559_P001 | Maize | nucleus | 69.94 | 79.05 |
| Zm00001d028986_P001 | Maize | nucleus | 70.51 | 77.71 |
| Os07t0684900-01 | Rice | nucleus | 50.28 | 68.32 |
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 12.36 | 67.69 |
| Os07t0533201-00 | Rice | mitochondrion, nucleus, peroxisome | 12.08 | 66.15 |
| GSMUA_Achr10P... | Banana | nucleus | 43.54 | 63.52 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 58.15 | 60.0 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 35.11 | 52.97 |
| Bra036446.1-P | Field mustard | nucleus | 37.64 | 50.57 |
| KRG94925 | Soybean | nucleus | 39.61 | 50.36 |
| GSMUA_Achr10P... | Banana | nucleus | 36.8 | 49.25 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 41.85 | 47.76 |
| PGSC0003DMT400069529 | Potato | nucleus | 32.87 | 47.76 |
| Os08t0242400-01 | Rice | nucleus | 37.92 | 47.54 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 42.13 | 47.32 |
| KRH64971 | Soybean | nucleus | 39.04 | 47.12 |
| CDY21173 | Canola | nucleus | 37.92 | 46.71 |
| CDY29949 | Canola | nucleus | 37.92 | 46.71 |
| Solyc06g072890.1.1 | Tomato | nucleus | 33.99 | 45.83 |
| Bra002108.1-P | Field mustard | nucleus | 34.55 | 45.05 |
| CDY16883 | Canola | nucleus | 34.83 | 44.93 |
| CDY38461 | Canola | nucleus | 34.55 | 44.89 |
| AT5G17810.2 | Thale cress | nucleus | 33.71 | 44.78 |
| Bra023638.1-P | Field mustard | nucleus | 33.99 | 44.0 |
| CDY02686 | Canola | nucleus | 34.83 | 43.82 |
| CDY66087 | Canola | nucleus | 33.43 | 42.5 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 38.2 | 41.72 |
| CDY72488 | Canola | nucleus, plastid | 28.37 | 40.89 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 41.01 | 40.22 |
| Bra031980.1-P | Field mustard | nucleus | 35.67 | 39.44 |
| CDY51756 | Canola | plastid | 35.96 | 39.26 |
| CDY50656 | Canola | nucleus | 35.67 | 37.46 |
| Os01t0840300-00 | Rice | cytosol, mitochondrion, nucleus | 6.74 | 36.92 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 40.73 | 34.52 |
| Os01t0854500-01 | Rice | nucleus | 9.83 | 17.5 |
| Os11t0102100-01 | Rice | nucleus | 10.96 | 16.67 |
| Os12t0101600-01 | Rice | nucleus | 10.96 | 16.67 |
| Os01t0667400-02 | Rice | plastid | 22.47 | 15.01 |
| Os01t0818400-01 | Rice | nucleus | 11.24 | 14.98 |
| Os04t0649400-01 | Rice | plastid | 9.55 | 14.41 |
| Os04t0663600-01 | Rice | nucleus | 11.24 | 13.84 |
| Os05t0118700-00 | Rice | nucleus | 10.39 | 12.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:4332705 | ProteinID:ABF95710.1 | EMBL:AK111000 | ProteinID:BAS83986.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlantsGene:Os03g0325600 |
| EnsemblPlants:Os03t0325600-01 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF280 | UniProt:Q10M28 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0000DB4213 | RefSeq:XP_015629005.1 | SEG:seg | : |
Description
WUSCHEL-LIKE HOMEOBOX 6Similar to WUSCHEL-related homeobox 6. (Os03t0325600-01);Homeodomain-like containing protein. (Os03t0325600-02)
Coordinates
chr3:-:11845870..11849001
Molecular Weight (calculated)
36476.9 Da
IEP (calculated)
8.487
GRAVY (calculated)
-0.115
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSNSPDR QSSGGSPPEE RGGGGSGGGG GRSAAGEPVR SRWTPKPEQI LILESIFNSG MVNPPKDETV RIRKLLERFG AVGDANVFYW FQNRRSRSRR
101: RQRQMQAAAA AAAAAASSSS PSANTSPAAA SAATVQVGLP PGAVVHTMAM GGSACQYEQQ ASSSSSSGST GGSSLGLFAH GAGASGAGGY LQASCGASAS
201: ASSALAPGLM GDVVDSGGSD DLFAISRQMG FVGSPRCSPA SSPATPSSAA TAAQQQFYSC QLPAATITVF INGVPMEMPR GPIDLRAMFG QDVMLVHSTG
301: ALLPVNDYGI LMQSLQIGES YFLVTIHLQA LTSWSHRSLS TPISQCSFVF MKAPHF
101: RQRQMQAAAA AAAAAASSSS PSANTSPAAA SAATVQVGLP PGAVVHTMAM GGSACQYEQQ ASSSSSSGST GGSSLGLFAH GAGASGAGGY LQASCGASAS
201: ASSALAPGLM GDVVDSGGSD DLFAISRQMG FVGSPRCSPA SSPATPSSAA TAAQQQFYSC QLPAATITVF INGVPMEMPR GPIDLRAMFG QDVMLVHSTG
301: ALLPVNDYGI LMQSLQIGES YFLVTIHLQA LTSWSHRSLS TPISQCSFVF MKAPHF
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVIILTQIY
301: FNFLVSFVCF IADRIPREYI CYIVWF
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FGGSSQVPSF FLGLSSSPSS CSSSSSTSSS ASSSSSYGGG CDNQSNSGME NLLTMSGQMS
201: YHEATHHHYQ NHSSNVTSIL CPSDQNSNFQ YQQGAITVFI NGVPTEVTRG GIDMKATFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVIILTQIY
301: FNFLVSFVCF IADRIPREYI CYIVWF
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.