Factsheet for Os04t0663600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	14.53	64.62
Zm00001d001948_P001	Maize	nucleus, plastid	53.29	48.12
OQU82514	Sorghum	nucleus	54.33	48.01
Zm00001d037309_P001	Maize	nucleus	20.76	47.62
Zm00001d026537_P001	Maize	plastid	52.6	46.77
TraesCS2A01G491900.1	Wheat	mitochondrion, plastid	48.44	45.45
Os05t0564500-00	Rice	mitochondrion, nucleus, peroxisome	9.34	41.54
Os07t0533201-00	Rice	mitochondrion, nucleus, peroxisome	9.0	40.0
Os01t0854500-01	Rice	nucleus	18.34	26.5
Os11t0102100-01	Rice	nucleus	19.72	24.36
Os12t0101600-01	Rice	nucleus	19.72	24.36
Os04t0649400-01	Rice	plastid	19.03	23.31
Os05t0118700-00	Rice	nucleus	22.15	22.38
Os08t0242400-01	Rice	nucleus	14.88	15.14
Os07t0684900-01	Rice	nucleus	13.15	14.5
Os01t0818400-01	Rice	nucleus	12.8	13.86
Os03t0325600-01	Rice	nucleus	13.84	11.24
Os01t0667400-02	Rice	plastid	13.15	7.13

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107275471	MapMan:15.5.3.6	UniProt:A0A0N7KJV6	ProteinID:BAS91481.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	EnsemblPlantsGene:Os04g0663600	EnsemblPlants:Os04t0663600-01	PFAM:PF00046	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF123	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000393AB16	RefSeq:XP_015635371.1	SEG:seg

Description

WUSCHEL-LIKE HOMEOBOX 1Homeobox protein orthologous to Arabidopsis WUS, Initiation of axillary meristem formation (Os04t0663600-01)

Coordinates

chr4:-:33860374..33861424

Molecular Weight (calculated)

30956.2 Da

IEP (calculated)

7.873

GRAVY (calculated)

-0.371

Length

289 amino acids

Sequence
(BLAST)

001: MDHMQQQQRQ QVGGGGGEEV AGRGGVPVCR PSGTRWTPTT EQIKILRELY YSCGIRSPNS EQIQRIAAML RQYGRIEGKN VFYWFQNHKA RERQKKRLTT
101: LDVTTTTAAA ADADASHLAV LSLSPTAAGA TAPSFPGFYV GNGGAVQTDQ ANVVNWDCTA MAAEKTFLQD YMGVSGVGCA AGAAPTPWAM TTTTREPETL
201: PLFPVVFVGG DGAHRHAVHG GFPSNFQRWG SAAATSNTIT VQQHLQQHNF YSSSSSQLHS QDGPAAGTSL ELTLSSYYCS CSPYPAGSM

Best Arabidopsis Sequence Match ( AT2G17950.1 )
(BLAST)

001: MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR
101: FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS
201: MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN

Arabidopsis Description

WUSProtein WUSCHEL [Source:UniProtKB/Swiss-Prot;Acc:Q9SB92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.