Factsheet for Os04t0649400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G542600.1	Wheat	plastid	70.76	70.46
TraesCS2A01G514000.1	Wheat	plastid	68.64	69.23
TraesCS2D01G515600.1	Wheat	plastid	69.07	68.78
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	17.8	64.62
OQU82449	Sorghum	plastid	65.68	63.27
Zm00001d026453_P001	Maize	plastid	66.53	62.8
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	44.49	44.87
Os05t0564500-00	Rice	mitochondrion, nucleus, peroxisome	12.29	44.62
Os07t0533201-00	Rice	mitochondrion, nucleus, peroxisome	11.86	43.08
Os01t0854500-01	Rice	nucleus	21.61	25.5
Os11t0102100-01	Rice	nucleus	20.76	20.94
Os12t0101600-01	Rice	nucleus	20.76	20.94
Os05t0118700-00	Rice	nucleus	23.73	19.58
Os04t0663600-01	Rice	nucleus	23.31	19.03
Os07t0684900-01	Rice	nucleus	14.83	13.36
Os01t0818400-01	Rice	nucleus	14.83	13.11
Os08t0242400-01	Rice	nucleus	13.98	11.62
Os03t0325600-01	Rice	nucleus	14.41	9.55
Os01t0667400-02	Rice	plastid	16.95	7.5

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EntrezGene:4337218	EMBL:AJ556181	EMBL:AM234750	ProteinID:BAF15996.1
ProteinID:BAS91342.1	ProteinID:CAD41713.2	ProteinID:CAE04492.1	ProteinID:EAZ32215.1	UniProt:F6MIV6	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009790
GO:GO:0009791	GO:GO:0009987	GO:GO:0010067	GO:GO:0010087	GO:GO:0051301	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	EMBL:JF836159	EnsemblPlantsGene:Os04g0649400	EnsemblPlants:Os04t0649400-01	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF263	UniProt:Q7XTV3	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI00001B0D29	RefSeq:XP_015635367.1	SEG:seg	:	:	:

Description

WUSCHEL-LIKE HOMEOBOX 4WUSCHEL-related homeobox protein, Meristem maintenance (Os04t0649400-01)

Coordinates

chr4:-:33095273..33096554

Molecular Weight (calculated)

25784.9 Da

IEP (calculated)

9.787

GRAVY (calculated)

-0.482

Length

236 amino acids

Sequence
(BLAST)

001: MRLHHLHVAY LDHKASSSSS SPAPPSISPS SIPGSAAFPA FSFKCLRPLA PKISLPEPRK MIAPPDFVVP RARNASKLLN YTVQVPAAGT TRWNPSAEQI
101: KVLEMLYRGG MRTPNSVQIE RITEELGKYG RIEGKNVFYW FQNHKARERQ KQKRAALLTL STLDPSLLPA TANETKEAPE KKEKDVEDGL ASCKRRCKAW
201: GDGAGDGDAV VATEAAGGCT DEVTLELFPL HPQGKA

Best Arabidopsis Sequence Match ( AT1G46480.1 )
(BLAST)

001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R

Arabidopsis Description

WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.