Factsheet for Os12t0101600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0102100-01	Rice	nucleus	100.0	100.0
Os01t0840300-00	Rice	cytosol, mitochondrion, nucleus	17.52	63.08
TraesCS5B01G156400.1	Wheat	nucleus	60.26	58.51
TraesCS5A01G157300.1	Wheat	nucleus	60.26	58.51
TraesCS5D01G162600.1	Wheat	nucleus	59.83	57.85
GSMUA_Achr8P02040_001	Banana	nucleus	30.77	56.25
HORVU5Hr1G049190.2	Barley	nucleus	44.44	55.91
GSMUA_Achr2P16080_001	Banana	nucleus	44.02	53.09
OQU82902	Sorghum	nucleus	57.69	51.92
GSMUA_Achr4P30610_001	Banana	nucleus	40.6	51.63
Zm00001d004889_P001	Maize	nucleus	57.69	51.53
GSMUA_Achr9P04090_001	Banana	nucleus	41.45	51.32
Zm00001d052598_P001	Maize	nucleus	57.69	50.94
Os05t0564500-00	Rice	mitochondrion, nucleus, peroxisome	12.39	44.62
Os07t0533201-00	Rice	mitochondrion, nucleus, peroxisome	11.97	43.08
Os05t0118700-00	Rice	nucleus	38.89	31.82
Os01t0854500-01	Rice	nucleus	23.08	27.0
Os04t0649400-01	Rice	plastid	20.94	20.76
Os04t0663600-01	Rice	nucleus	24.36	19.72
Os07t0684900-01	Rice	nucleus	17.95	16.03
Os01t0818400-01	Rice	nucleus	15.81	13.86
Os08t0242400-01	Rice	nucleus	16.67	13.73
Os03t0325600-01	Rice	nucleus	16.67	10.96
Os01t0667400-02	Rice	plastid	17.09	7.5

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107275468	EntrezGene:107276476	MapMan:15.5.3.6	UniProt:A0A0P0Y5V3	ProteinID:BAT12269.1
ProteinID:BAT15446.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	EnsemblPlantsGene:Os12g0101600	EnsemblPlants:Os12t0101600-01	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF336	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00015EEAD2
RefSeq:XP_015619605.1	SEG:seg	:	:	:	:

Description

NARROW LEAF 3WUS-type homenodomain protein, Leaf development (Os12t0101600-01);WUS-type homenodomain protein, Leaf development (Os12t0101600-02)

Coordinates

chr12:+:64393..67038

Molecular Weight (calculated)

25922.6 Da

IEP (calculated)

8.889

GRAVY (calculated)

-0.652

Length

234 amino acids

Sequence
(BLAST)

001: MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAAEIQQITA HLAYYGRIEG KNVFYWFQNH KARERQRLRR RLCARHQQQP SPPSSTVPPA PTAAAAGAVV
101: QVHPAVMQLH HHHHHHHPYA AAAAAQSHHL QQQQQQQAEW PAAVDYCSTA SASASATAAD MAIPPCCRPL KTLELFPTKS TSGGLKEDCC SSSKPWARSV
201: VESLGGRERS SLAVVDSGGD MDGIERRRRE LGER

Best Arabidopsis Sequence Match ( AT2G28610.1 )
(BLAST)

001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL

Arabidopsis Description

WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.