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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • nucleus 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0564500-00 Rice mitochondrion, nucleus, peroxisome 41.54 41.54
Os07t0533201-00 Rice mitochondrion, nucleus, peroxisome 38.46 38.46
Os01t0854500-01 Rice nucleus 58.46 19.0
HORVU3Hr1G086450.1 Barley nucleus, plastid 78.46 18.61
TraesCS5A01G085000.1 Wheat nucleus 89.23 18.24
HORVU5Hr1G022120.1 Barley nucleus 76.92 18.12
TraesCS5B01G091000.1 Wheat nucleus 89.23 18.07
TraesCS5D01G097400.1 Wheat nucleus 89.23 18.01
TraesCS3D01G352600.1 Wheat nucleus 78.46 17.89
Os04t0649400-01 Rice plastid 64.62 17.8
TraesCS3D01G352500.1 Wheat nucleus 81.54 17.79
TraesCS3A01G358200.1 Wheat nucleus 78.46 17.71
TraesCS3A01G358100.1 Wheat nucleus 81.54 17.61
Zm00001d042920_P001 Maize nucleus 87.69 17.59
Os11t0102100-01 Rice nucleus 63.08 17.52
Os12t0101600-01 Rice nucleus 63.08 17.52
TraesCS3B01G391100.1 Wheat nucleus 80.0 17.39
TraesCS3B01G391200.1 Wheat nucleus 72.31 16.21
OQU87830 Sorghum nucleus 84.62 16.18
TraesCS3D01G352700.1 Wheat nucleus 70.77 15.81
Os05t0118700-00 Rice nucleus 67.69 15.38
HORVU3Hr1G086430.1 Barley nucleus 66.15 15.19
TraesCS3A01G358400.1 Wheat nucleus 67.69 15.17
Zm00001d012419_P001 Maize nucleus 78.46 14.87
Os04t0663600-01 Rice nucleus 64.62 14.53
Os01t0818400-01 Rice nucleus 47.69 11.61
Os07t0684900-01 Rice nucleus 36.92 9.16
Os08t0242400-01 Rice nucleus 36.92 8.45
Os03t0325600-01 Rice nucleus 36.92 6.74
Os01t0667400-02 Rice plastid 40.0 4.88
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.6UniProt:A0A0P0VAA0ProteinID:BAS75151.1GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987InterPro:Homeobox-like_sfInterPro:Homeobox_domInterPro:IPR001356EnsemblPlantsGene:Os01g0840300
EnsemblPlants:Os01t0840300-00PFAM:PF00046PFscan:PS50071PANTHER:PTHR24326PANTHER:PTHR24326:SF203SMART:SM00389
SUPFAM:SSF46689UniParc:UPI0000E5D70D::::
Description
WUSCHEL-LIKE HOMEOBOX 5Similar to WUSCHEL-related homeobox 5. (Os01t0840300-00)
Coordinates
chr1:-:36059256..36059450
Molecular Weight (calculated)
7741.2 Da
IEP (calculated)
11.184
GRAVY (calculated)
-1.032
Length
65 amino acids
Sequence
(BLAST)
1: LANARWTPTK EQIAVLEGLY RQGLRTPTAE QIQQITARLR EHGHIEGKNV FYWFQNHKAR QRQKQ
Best Arabidopsis Sequence Match ( AT5G59340.1 )
(BLAST)
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.