Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0840300-00 | Rice | cytosol, mitochondrion, nucleus | 18.12 | 76.92 |
| TraesCS5A01G085000.1 | Wheat | nucleus | 79.35 | 68.87 |
| TraesCS5B01G091000.1 | Wheat | nucleus | 79.35 | 68.22 |
| TraesCS5D01G097400.1 | Wheat | nucleus | 78.99 | 67.7 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 44.2 | 44.53 |
| HORVU3Hr1G086430.1 | Barley | nucleus | 44.93 | 43.82 |
| Zm00001d042920_P001 | Maize | nucleus | 46.01 | 39.2 |
| Zm00001d012419_P001 | Maize | nucleus | 48.19 | 38.78 |
| OQU87830 | Sorghum | nucleus | 46.38 | 37.65 |
| HORVU5Hr1G049190.2 | Barley | nucleus | 16.3 | 24.19 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 18.12 | 23.81 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 10.14 | 21.71 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 9.06 | 19.23 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 19.57 | 19.22 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 9.42 | 13.4 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 11.23 | 11.88 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 13.77 | 11.01 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 9.78 | 10.84 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 10.51 | 10.82 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 15.58 | 8.33 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A287QMF0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:HORVU5Hr1G022120 |
| EnsemblPlants:HORVU5Hr1G022120.1 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000B47286E | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:111001243..111003388
Molecular Weight (calculated)
29559.6 Da
IEP (calculated)
10.144
GRAVY (calculated)
-0.549
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: AAAAAGNARW TPTKEQIGVL EGLYRQGLRN PTTEQIEQVA ARLQKHGPVE GKNVFYWFQN HTARHRQRQK QQAFDYFSKQ FRRPQPLPVL HRAAAHPSLP
101: PVPLHAPPPD DHAPPACNGQ AMYRQQPCYV TAAAAATQAA ANAQAQAQTP LLYPRAETVA HDKVPTPAPA PATVYYQGAA ANNASTQQSR ALQFPPAAGT
201: RGPSDARPRR PETLNLFPLH PTFAIPEKTR AGGIAGSVTL SPAAPSASGS GAFSWEPESA SGDASLPLYD FFGVGR
101: PVPLHAPPPD DHAPPACNGQ AMYRQQPCYV TAAAAATQAA ANAQAQAQTP LLYPRAETVA HDKVPTPAPA PATVYYQGAA ANNASTQQSR ALQFPPAAGT
201: RGPSDARPRR PETLNLFPLH PTFAIPEKTR AGGIAGSVTL SPAAPSASGS GAFSWEPESA SGDASLPLYD FFGVGR
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.