Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G156400.1 | Wheat | nucleus | 86.56 | 66.81 |
| TraesCS5A01G157300.1 | Wheat | nucleus | 84.95 | 65.56 |
| TraesCS5D01G162600.1 | Wheat | nucleus | 84.95 | 65.29 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 37.63 | 54.69 |
| Os12t0101600-01 | Rice | nucleus | 55.91 | 44.44 |
| Os11t0102100-01 | Rice | nucleus | 55.91 | 44.44 |
| Zm00001d004889_P001 | Maize | nucleus | 61.29 | 43.51 |
| OQU82902 | Sorghum | nucleus | 60.75 | 43.46 |
| Zm00001d052598_P001 | Maize | nucleus | 60.75 | 42.64 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 42.47 | 41.8 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 39.78 | 40.22 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 40.32 | 38.66 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 44.62 | 29.54 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 18.82 | 27.13 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 16.13 | 23.08 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 20.43 | 18.1 |
| HORVU3Hr1G086430.1 | Barley | nucleus | 25.27 | 16.61 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 24.19 | 16.42 |
| HORVU5Hr1G022120.1 | Barley | nucleus | 24.19 | 16.3 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 16.13 | 15.46 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 16.67 | 11.88 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 16.13 | 11.19 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 16.13 | 8.7 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 20.43 | 7.36 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 8.06 | 6.02 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A287R4V3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:HORVU5Hr1G049190 |
| EnsemblPlants:HORVU5Hr1G049190.2 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF336 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000B464773 | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:381765642..381766908
Molecular Weight (calculated)
18833.1 Da
IEP (calculated)
8.134
GRAVY (calculated)
-0.613
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAAEIQQITA HLAYYGRIEG KNVFYWFQNH KARERQRLRR RACARHQQPS SPAAPPPTTH TGAAGGGGNA
101: AGATAGVNAM HPAVMQLHHH TYATSCFMAP QGYLQQETAA AGALPVSGLE FAGKTSQQQX XXXXXXXXXX XGMDDAAADG DGEHQH
101: AGATAGVNAM HPAVMQLHHH TYATSCFMAP QGYLQQETAA AGALPVSGLE FAGKTSQQQX XXXXXXXXXX XGMDDAAADG DGEHQH
001: MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
101: QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP
201: SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL
Arabidopsis Description
WOX3Homeobox-leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q1PEZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.