Factsheet for HORVU1Hr1G087950.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0564500-00	Rice	mitochondrion, nucleus, peroxisome	44.19	87.69
TraesCS1A01G399400.1	Wheat	nucleus	93.02	24.69
TraesCS1D01G406900.1	Wheat	nucleus	93.02	24.69
TraesCS1B01G427400.1	Wheat	nucleus, plastid	91.47	24.33
HORVU3Hr1G013330.1	Barley	nucleus	32.56	21.65
CDX87744	Canola	nucleus	52.71	21.25
CDY48780	Canola	nucleus	52.71	21.25
AT5G45980.1	Thale cress	nucleus	51.94	20.62
Solyc02g077390.1.1	Tomato	nucleus	55.81	20.11
Bra022008.1-P	Field mustard	nucleus	46.51	19.48
HORVU3Hr1G080690.1	Barley	nucleus	19.38	19.23
HORVU5Hr1G049190.2	Barley	nucleus	27.13	18.82
KRH50138	Soybean	nucleus	55.81	18.56
KRH20358	Soybean	nucleus	55.81	18.51
KRH30862	Soybean	nucleus	57.36	18.5
KRH32713	Soybean	nucleus	57.36	18.36
VIT_10s0003g00560.t01	Wine grape	nucleus	57.36	17.96
GSMUA_Achr9P06660_001	Banana	nucleus	53.49	17.83
PGSC0003DMT400027850	Potato	nucleus	44.19	17.12
HORVU3Hr1G013290.3	Barley	nucleus	33.33	16.48
GSMUA_Achr8P27170_001	Banana	nucleus	54.26	15.66
KXG22537	Sorghum	plastid	55.04	14.31
HORVU3Hr1G060950.1	Barley	nucleus, plastid	53.49	13.37
HORVU3Hr1G085050.3	Barley	nucleus	21.71	13.33
Zm00001d039017_P001	Maize	nucleus	48.84	12.78
HORVU4Hr1G051530.5	Barley	nucleus	34.11	12.75
HORVU3Hr1G080660.5	Barley	nucleus	23.26	11.19
HORVU3Hr1G086450.1	Barley	nucleus, plastid	23.26	10.95
HORVU1Hr1G010580.2	Barley	nucleus, plastid	22.48	10.32
HORVU5Hr1G022120.1	Barley	nucleus	21.71	10.14
HORVU3Hr1G086430.1	Barley	nucleus	20.93	9.54
HORVU1Hr1G087940.1	Barley	cytosol, plasma membrane, plastid	6.2	3.21

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	UniProt:A0A287GM65	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:HORVU1Hr1G087950
EnsemblPlants:HORVU1Hr1G087950.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF308	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000B47AE9B	SEG:seg

Description

No Description!

Coordinates

chrchr1H:-:540697582..540698431

Molecular Weight (calculated)

14737.3 Da

IEP (calculated)

11.110

GRAVY (calculated)

-0.875

Length

129 amino acids

Sequence
(BLAST)

001: MASSNKHWPS MFRSNPGACD VQFHHQPDMS NAHTRPSLIS SGLDQENVRS PGESKPRWNP RPEQIRILEG IFNSGVVNPP RDEIRRIRLR LQEYGHVADA
101: NVFYWFQNRK SRTKYRLRAA AAAAAAQGQ

Best Arabidopsis Sequence Match ( AT2G33880.1 )
(BLAST)

001: MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLI

Arabidopsis Description

WOX9WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.