Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 13.42 | 92.31 |
| Os07t0533201-00 | Rice | mitochondrion, nucleus, peroxisome | 13.2 | 90.77 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 58.17 | 67.18 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 15.66 | 54.26 |
| Solyc02g077390.1.1 | Tomato | nucleus | 40.72 | 50.84 |
| PGSC0003DMT400027850 | Potato | nucleus | 34.9 | 46.85 |
| VIT_10s0003g00560.t01 | Wine grape | nucleus | 42.95 | 46.6 |
| KRH30862 | Soybean | nucleus | 40.27 | 45.0 |
| KRH32713 | Soybean | nucleus | 39.37 | 43.67 |
| KRH20358 | Soybean | nucleus | 37.81 | 43.44 |
| KRH50138 | Soybean | nucleus | 37.36 | 43.04 |
| CDX87744 | Canola | nucleus | 28.64 | 40.0 |
| CDY48780 | Canola | nucleus | 28.64 | 40.0 |
| Bra022008.1-P | Field mustard | nucleus | 26.85 | 38.96 |
| AT5G45980.1 | Thale cress | nucleus | 27.52 | 37.85 |
| GSMUA_Achr10P... | Banana | nucleus | 17.45 | 31.97 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 8.72 | 30.47 |
| KXG22537 | Sorghum | plastid | 32.44 | 29.23 |
| GSMUA_Achr10P... | Banana | nucleus | 16.78 | 28.2 |
| Zm00001d039017_P001 | Maize | nucleus | 30.43 | 27.59 |
| Os01t0667400-02 | Rice | plastid | 32.66 | 27.39 |
| OQU87296 | Sorghum | plastid | 32.44 | 27.2 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 29.98 | 26.02 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 18.34 | 25.87 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 29.75 | 25.78 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 29.53 | 25.73 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 17.9 | 25.64 |
| TraesCS3A01G247200.1 | Wheat | nucleus, plastid | 29.53 | 25.63 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 27.74 | 25.51 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 18.12 | 25.31 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 27.52 | 25.31 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 27.07 | 24.95 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 9.17 | 24.85 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 7.38 | 23.08 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 18.57 | 22.86 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 9.62 | 22.75 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 9.17 | 22.28 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 9.62 | 22.16 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 9.62 | 21.5 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 8.95 | 20.73 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 18.34 | 19.52 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 10.07 | 18.99 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 9.84 | 18.8 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 9.17 | 18.64 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 8.72 | 18.48 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 7.83 | 18.42 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 9.4 | 17.95 |
| GSMUA_Achr10P... | Banana | nucleus | 9.17 | 17.6 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 10.29 | 16.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.29 | 16.2 |
| GSMUA_Achr10P... | Banana | nucleus | 9.84 | 16.12 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSMUA_Achr8G27170_001 | EnsemblPlants:GSMUA_Achr8P27170_001 | EnsemblPlants:GSMUA_Achr8T27170_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| UniProt:M0TU20 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF308 | SMART:SM00389 |
| SUPFAM:SSF46689 | TMHMM:TMhelix | UniParc:UPI0002950E02 | SEG:seg | : | : |
Description
Putative WOX9-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G27170_001]
Coordinates
chr8:+:30421633..30423830
Molecular Weight (calculated)
48033.7 Da
IEP (calculated)
8.978
GRAVY (calculated)
-0.279
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSNRHWPS MFKSKPCNAH HHQWQHDINS CHQKTPYASG FEERSPEPKP RWNPKPEQIR ILEAIFNSGM VNPPRDEIRR IRAQLQEYGQ VGDANVFYWF
101: QNRKSRSKNK QRHLQATRSQ TQPSSAAPSP PPVATKPTST ATSSSSSSSE QSTGSDKTQL PVASMGGALT SMVHSAAPLP VTSVNPMYLH GSLELGGESF
201: LLQGPQGYCF PAAELTGIIG VPEHGTGVHP GPWGDLMGFK SGEDDAKVTV QLHHLYGTGS SSAPSVATTV TSANASGGGG ATAGRGLYAY VVEKIERMVI
301: GRVHGIEIRQ VLHQHVIPSS SNHNYASIYI IRPFNTFIPP MSSSSSATVM GVGGSGGAAA ARSTVFINEV AFEVAAGPVN VREAFGHEAI LIDHSGRPVL
401: TDEWGVTIHP LRHGASYYLV LSLSLSLYFM LLWISSSSSS NAVVMQV
101: QNRKSRSKNK QRHLQATRSQ TQPSSAAPSP PPVATKPTST ATSSSSSSSE QSTGSDKTQL PVASMGGALT SMVHSAAPLP VTSVNPMYLH GSLELGGESF
201: LLQGPQGYCF PAAELTGIIG VPEHGTGVHP GPWGDLMGFK SGEDDAKVTV QLHHLYGTGS SSAPSVATTV TSANASGGGG ATAGRGLYAY VVEKIERMVI
301: GRVHGIEIRQ VLHQHVIPSS SNHNYASIYI IRPFNTFIPP MSSSSSATVM GVGGSGGAAA ARSTVFINEV AFEVAAGPVN VREAFGHEAI LIDHSGRPVL
401: TDEWGVTIHP LRHGASYYLV LSLSLSLYFM LLWISSSSSS NAVVMQV
001: MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLI
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLI
Arabidopsis Description
WOX9WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.