Factsheet for GSMUA_Achr10P07260_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P29470_001	Banana	nucleus	37.36	61.82
GSMUA_Achr1P17980_001	Banana	nucleus	51.65	59.49
GSMUA_Achr7P04050_001	Banana	nucleus	49.82	58.12
GSMUA_Achr4P25530_001	Banana	nucleus	42.86	55.45
GSMUA_AchrUn_...	Banana	nucleus	56.41	54.23
GSMUA_Achr3P14840_001	Banana	nucleus	53.48	51.59
GSMUA_Achr5P11080_001	Banana	nucleus	41.03	50.91
CDY01358	Canola	nucleus	23.81	48.87
Bra012245.1-P	Field mustard	nucleus	23.81	48.87
AT1G20710.1	Thale cress	nucleus	29.67	41.12
CDY29511	Canola	nucleus	29.67	39.9
Bra025839.1-P	Field mustard	nucleus	29.67	39.9
CDY65899	Canola	nucleus	30.4	39.71
CDY31870	Canola	nucleus	27.84	38.97
CDX93197	Canola	nucleus	27.84	38.97
AT1G20700.1	Thale cress	nucleus	29.67	38.39
GSMUA_Achr8P02040_001	Banana	nucleus	11.72	25.0
GSMUA_Achr7P07430_001	Banana	nucleus	10.26	19.58
GSMUA_Achr4P30610_001	Banana	nucleus	12.45	18.48
GSMUA_Achr2P16080_001	Banana	nucleus	12.45	17.53
GSMUA_Achr9P04090_001	Banana	nucleus	12.09	17.46
GSMUA_Achr7P14860_001	Banana	nucleus	11.72	16.84
GSMUA_Achr7P18230_001	Banana	nucleus	11.72	16.58
GSMUA_Achr5P29220_001	Banana	nucleus	12.09	16.5
GSMUA_Achr10P...	Banana	nucleus	12.82	15.02
GSMUA_Achr10P...	Banana	nucleus	13.19	14.75
GSMUA_Achr10P...	Banana	nucleus	13.55	13.91
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	10.99	12.82
GSMUA_Achr3P09460_001	Banana	nucleus	14.29	12.19
GSMUA_Achr5P27730_001	Banana	nucleus	13.55	11.86
GSMUA_Achr6P15910_001	Banana	nucleus	12.82	11.04
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	14.65	11.02
GSMUA_Achr9P06660_001	Banana	nucleus	15.38	10.85
GSMUA_Achr8P27170_001	Banana	nucleus	16.12	9.84
GSMUA_Achr8P01590_001	Banana	nucleus	13.92	9.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr10G07260_001	EnsemblPlants:GSMUA_Achr10P07260_001
EnsemblPlants:GSMUA_Achr10T07260_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0RG52	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00029618C4
SEG:seg	:	:	:	:	:

Description

WUSCHEL-related homeobox 8 [Source:GMGC_GENE;Acc:GSMUA_Achr10G07260_001]

Coordinates

chr10:-:17537993..17540730

Molecular Weight (calculated)

30383.5 Da

IEP (calculated)

5.059

GRAVY (calculated)

-0.759

Length

273 amino acids

Sequence
(BLAST)

001: MERQDASDSG ADGTRSSEIG EERGEGDRVA EGVLCVKVMT DEQVEVLRRQ IAVYATICEQ LVEMHRAFAA DQDSLAGLKL GSGYCESMMA SGGHKMIPRQ
101: RWCPTTKQLQ MLENIFDQGN GTPSKQRIKE ITLELSLHGQ ISEMNVYNWF QNRRARSKRK QTAPSNNEYE VDTDCESPNF KIFKSDEPPH EDQLVGTDNY
201: PIHNAQVSNA LHPLGPESNQ TLGTHGSNES SKSGGMSYQN FLSSQRVDQL MENMDIPGSF SPFHPGKSYG MIG

Best Arabidopsis Sequence Match ( AT4G35550.1 )
(BLAST)

001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG

Arabidopsis Description

WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.