Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400053435 | Potato | nucleus | 45.26 | 54.78 |
| Solyc03g096300.2.1 | Tomato | nucleus | 45.26 | 54.43 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 38.95 | 52.48 |
| KRG97769 | Soybean | nucleus | 47.37 | 51.72 |
| AT5G05770.1 | Thale cress | nucleus | 32.63 | 50.82 |
| Os01t0854500-01 | Rice | nucleus | 52.63 | 50.0 |
| KRH73152 | Soybean | nucleus | 46.32 | 49.72 |
| KRH31116 | Soybean | nucleus | 46.84 | 49.44 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 51.05 | 46.41 |
| OQU87881 | Sorghum | nucleus | 53.16 | 46.33 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 51.05 | 46.19 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 51.05 | 46.19 |
| Bra028749.1-P | Field mustard | nucleus | 42.11 | 45.98 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 51.05 | 45.75 |
| Zm00001d042821_P001 | Maize | nucleus | 53.16 | 45.7 |
| AT3G11260.1 | Thale cress | nucleus | 43.16 | 45.05 |
| CDY14103 | Canola | nucleus | 44.21 | 43.98 |
| CDX98862 | Canola | nucleus | 44.21 | 43.75 |
| CDY04966 | Canola | nucleus | 43.68 | 43.46 |
| CDY08539 | Canola | nucleus | 43.68 | 43.46 |
| Zm00001d012330_P001 | Maize | nucleus | 53.68 | 43.4 |
| Bra034855.1-P | Field mustard | mitochondrion | 32.63 | 43.36 |
| Bra009132.1-P | Field mustard | nucleus | 43.68 | 43.23 |
| CDX70130 | Canola | nucleus | 43.68 | 43.23 |
| CDY01007 | Canola | nucleus | 43.16 | 42.93 |
| GSMUA_Achr8P02040_001 | Banana | nucleus | 23.16 | 34.38 |
| GSMUA_Achr4P30610_001 | Banana | nucleus | 28.95 | 29.89 |
| GSMUA_Achr7P07430_001 | Banana | nucleus | 21.58 | 28.67 |
| GSMUA_Achr2P16080_001 | Banana | nucleus | 28.42 | 27.84 |
| GSMUA_Achr7P18230_001 | Banana | nucleus | 27.89 | 27.46 |
| GSMUA_Achr9P04090_001 | Banana | nucleus | 26.84 | 26.98 |
| GSMUA_Achr5P29220_001 | Banana | nucleus | 24.74 | 23.5 |
| GSMUA_Achr10P... | Banana | nucleus | 25.79 | 21.03 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 25.79 | 20.94 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 14.74 | 16.97 |
| GSMUA_Achr10P... | Banana | nucleus | 19.47 | 15.16 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 17.37 | 15.0 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 15.26 | 13.74 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 16.84 | 13.5 |
| GSMUA_Achr10P... | Banana | nucleus | 18.42 | 13.16 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 15.79 | 12.82 |
| GSMUA_Achr10P... | Banana | nucleus | 16.84 | 11.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.37 | 11.62 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 18.95 | 11.36 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 16.32 | 10.95 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 17.89 | 10.9 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 17.37 | 10.31 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 18.42 | 9.64 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 19.47 | 9.56 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 17.37 | 7.86 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 18.42 | 7.83 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr7G14860_001 | EnsemblPlants:GSMUA_Achr7P14860_001 |
| EnsemblPlants:GSMUA_Achr7T14860_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0THM3 | PFAM:PF00046 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF149 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002968C63 |
| SEG:seg | : | : | : | : | : |
Description
WUSCHEL-related homeobox 9 [Source:GMGC_GENE;Acc:GSMUA_Achr7G14860_001]
Coordinates
chr7:+:11917724..11918459
Molecular Weight (calculated)
22047.0 Da
IEP (calculated)
8.756
GRAVY (calculated)
-0.815
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGERAAES GGFSATRAGA KCGRWNPTAE QVKVLTDLFR SGLRTPSTDQ IQMISAHLSA FGKIESKNVF YWFQNHKARE RHHKKRRRGP RDEEDDDGDH
101: QKARSRCLAS EFIYIHLHAR IHFSIYCCTK GKQDLFWQRQ ERETETLELF PLKSCSSDEE KVMSMRSELW GRPFLDAARD PPLDLRLSFI
101: QKARSRCLAS EFIYIHLHAR IHFSIYCCTK GKQDLFWQRQ ERETETLELF PLKSCSSDEE KVMSMRSELW GRPFLDAARD PPLDLRLSFI
001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
Arabidopsis Description
WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.