Factsheet for AT3G11260.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034855.1-P	Field mustard	mitochondrion	65.93	83.92
CDY01007	Canola	nucleus	87.36	83.25
CDY08539	Canola	nucleus	84.62	80.63
AT5G05770.1	Thale cress	nucleus	42.86	63.93
Solyc03g096300.2.1	Tomato	nucleus	53.3	61.39
PGSC0003DMT400053435	Potato	nucleus	52.75	61.15
KRH73152	Soybean	nucleus	57.14	58.76
KRG97769	Soybean	nucleus	54.4	56.9
KRH31116	Soybean	nucleus	55.49	56.11
VIT_13s0019g03460.t01	Wine grape	nucleus	41.21	53.19
Os01t0854500-01	Rice	nucleus	48.35	44.0
GSMUA_Achr7P14860_001	Banana	nucleus	45.05	43.16
OQU87881	Sorghum	nucleus	48.35	40.37
Zm00001d042821_P001	Maize	nucleus	47.25	38.91
TraesCS3B01G399800.1	Wheat	nucleus	44.51	38.76
HORVU3Hr1G085050.3	Barley	nucleus	44.51	38.57
TraesCS3D01G361100.1	Wheat	nucleus	44.51	38.57
TraesCS3A01G368100.1	Wheat	nucleus	44.51	38.21
Zm00001d012330_P001	Maize	nucleus	47.25	36.6
AT2G28610.1	Thale cress	nucleus	26.92	20.08
AT1G46480.1	Thale cress	nucleus	27.47	19.92
AT2G17950.1	Thale cress	nucleus	31.32	19.52
AT2G01500.1	Thale cress	nucleus	28.02	18.82
AT5G59340.1	Thale cress	nucleus	26.37	18.46
AT1G20710.1	Thale cress	nucleus	16.48	15.23
AT3G18010.1	Thale cress	nucleus	28.57	14.86
AT1G20700.1	Thale cress	nucleus	17.03	14.69
AT5G17810.2	Thale cress	nucleus	17.58	11.94
AT4G35550.1	Thale cress	nucleus	17.03	11.57
AT5G45980.1	Thale cress	nucleus	20.33	11.38
AT2G33880.2	Thale cress	nucleus	23.08	10.82
AT3G03660.3	Thale cress	nucleus, plastid	17.03	9.51

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EntrezGene:820297	UniProt:A0A178VHH8	ProteinID:AAG50976.1	EMBL:AB493609
ProteinID:AEE75021.1	ArrayExpress:AT3G11260	EnsemblPlantsGene:AT3G11260	RefSeq:AT3G11260	TAIR:AT3G11260	RefSeq:AT3G11260-TAIR-G
EnsemblPlants:AT3G11260.1	TAIR:AT3G11260.1	EMBL:AY150812	EMBL:AY251398	UniProt:C0SVA6	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719
GO:GO:0009733	GO:GO:0009987	GO:GO:0010078	GO:GO:0043565	GO:GO:1902459	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	RefSeq:NP_187735.2	ProteinID:OAP04775.1	PFAM:PF00046	PO:PO:0020149
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF149	UniProt:Q8H1D2	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI00000ADAA1	Symbol:WOX5	SEG:seg	:	:	:

Description

WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]

Coordinates

chr3:+:3527280..3528440

Molecular Weight (calculated)

21226.8 Da

IEP (calculated)

8.477

GRAVY (calculated)

-0.930

Length

182 amino acids

Sequence
(BLAST)

001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.