Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98862 | Canola | nucleus | 87.7 | 55.73 |
| CDX70130 | Canola | nucleus | 84.43 | 53.65 |
| Bra009132.1-P | Field mustard | nucleus | 84.43 | 53.65 |
| CDY14103 | Canola | nucleus | 82.79 | 52.88 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 60.66 | 52.48 |
| CDY04966 | Canola | nucleus | 80.33 | 51.31 |
| Bra028749.1-P | Field mustard | nucleus | 70.49 | 49.43 |
| AT3G11260.1 | Thale cress | nucleus | 63.93 | 42.86 |
| Solyc03g096300.2.1 | Tomato | nucleus | 51.64 | 39.87 |
| PGSC0003DMT400053435 | Potato | nucleus | 50.82 | 39.49 |
| KRG97769 | Soybean | nucleus | 54.92 | 38.51 |
| KRH73152 | Soybean | nucleus | 55.74 | 38.42 |
| KRH31116 | Soybean | nucleus | 54.1 | 36.67 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 50.82 | 32.63 |
| Os01t0854500-01 | Rice | nucleus | 49.18 | 30.0 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 48.36 | 28.23 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 48.36 | 28.1 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 48.36 | 28.1 |
| OQU87881 | Sorghum | nucleus | 50.0 | 27.98 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 48.36 | 27.83 |
| Zm00001d042821_P001 | Maize | nucleus | 49.18 | 27.15 |
| Zm00001d012330_P001 | Maize | nucleus | 50.0 | 25.96 |
| AT1G46480.1 | Thale cress | nucleus | 37.7 | 18.33 |
| AT5G59340.1 | Thale cress | nucleus | 35.25 | 16.54 |
| AT2G01500.1 | Thale cress | nucleus | 35.25 | 15.87 |
| AT2G28610.1 | Thale cress | nucleus | 31.15 | 15.57 |
| AT1G20710.1 | Thale cress | nucleus | 22.95 | 14.21 |
| AT2G17950.1 | Thale cress | nucleus | 33.61 | 14.04 |
| AT3G18010.1 | Thale cress | nucleus | 37.7 | 13.14 |
| AT1G20700.1 | Thale cress | nucleus | 20.49 | 11.85 |
| AT4G35550.1 | Thale cress | nucleus | 22.95 | 10.45 |
| AT5G45980.1 | Thale cress | nucleus | 27.05 | 10.15 |
| AT5G17810.2 | Thale cress | nucleus | 20.49 | 9.33 |
| AT2G33880.2 | Thale cress | nucleus | 23.77 | 7.47 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 18.85 | 7.06 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:830462 | EMBL:AB493739 | ProteinID:AED90922.1 | ArrayExpress:AT5G05770 |
| EnsemblPlantsGene:AT5G05770 | RefSeq:AT5G05770 | TAIR:AT5G05770 | RefSeq:AT5G05770-TAIR-G | EnsemblPlants:AT5G05770.1 | TAIR:AT5G05770.1 |
| ProteinID:BAB09671.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_196196.1 | PFAM:PF00046 | PO:PO:0000060 |
| PO:PO:0020127 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF149 | UniProt:Q9FFK0 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI00000A942F | Symbol:WOX7 | SEG:seg | : | : |
Description
WOX7WUSCHEL-related homeobox 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFK0]
Coordinates
chr5:+:1734427..1734855
Molecular Weight (calculated)
13997.8 Da
IEP (calculated)
11.109
GRAVY (calculated)
-0.990
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRGFNIKA RGLCNNNNGG GGTGAKCGRW NPTVEQVKLL TDLFKAGLRT PSTDQIQKIS MELSFYGKIE SKNVFYWFQN HKARERQKCR KISTVKFDHR
101: QDTDLSKPRR DNVRRHQLPA KG
101: QDTDLSKPRR DNVRRHQLPA KG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.